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The map label for this gene is trkA [H]

Identifier: 126209023

GI number: 126209023

Start: 1782709

End: 1784085

Strand: Reverse

Name: trkA [H]

Synonym: APL_1559

Alternate gene names: 126209023

Gene position: 1784085-1782709 (Counterclockwise)

Preceding gene: 126209024

Following gene: 126209021

Centisome position: 78.44

GC content: 46.04

Gene sequence:

>1377_bases
ATGAAAATTATTATTTTAGGTGCGGGTCAGGTCGGTTCGACCCTTGCGGAAAACTTAGTGAGTGAAGATAACGATATTAC
CTTGATCGATGACGACCAAAGTCGTTTGAACACGTTGCAAGATAAGCACGATTTGCAAGTATTAAAAGGCAACGGCGCAT
CACCGCGCATTTTACGTGATGCGGGAGCGGGTGATGCGGATTTATTGGTGGCGGTTACCGAAAGCGACGAAACCAATATG
ATAGCCTGCCAAATTGCGCATACCTTGTTCCATATTCCGACCAAAATCGCCCGTATTCGTAATTCCGATTACGTACGAGA
AAAAGATCAGCTGTTTAATGACGCGGCGTTGCCGATCGACCATATTATCGCACCGGAAGTGTTGGTAAAAAAAGAAATAT
TACGTCTGATTAATTACCCCGGTGCGTTACAAGTGGCGCATTTCGCCAATGAATTGGTGAGTTTGGTCAGCGTAAAAGCC
TATTACGGCGGTCCGTTAGTCGGTTATCCGATTTCCGCTTTACGTGATCATTTGCCTTATATCGAAGCGCGTGTCGTTGC
GATTTTCCGTCAAGAACGAGCGATTTTGCCGCAAGGCTCGACCATTATTGAAGCGGGCGATGAAGTGTTCTTTATCTGCG
CGACTCATAATATAAAAGCGGTGATGAGCGAAATGCAACGCTTGGATAAACCGCATAAGCGAGTGATGATCGTCGGCGGT
GGCAGTATCGGTATGGGGTTGGCGAAAGATCTTGAAGAACAATACAGCGTGAAAATGATCGAACGAGAGCCGAAACGAGC
GGAAAAGCTGGCGCAGAAGTTGGAAAAAACGCTGGTGTTGTGCGGCGATGCGTCGGATCAGGAACTCTTGTTTGAAGAAC
ATATCGAGAATATCGATTTATTTTTGGCGTTAAGCGGCGATGACGAAGCCAATATTATGTCGGCGCTATTGGCTAAACGA
TTAGGTGCGCAGAAAGCGATTGTATTAGTACAGCGTACGGCATATTTGCATCTGATTCAAGGCGGTACGATCGATATTGC
GCTTTCACCGAAACAAGCGACCATTTCCGCCTTATCCAGTCACGTACGTAAAGGTGATATCGTGCAAGTGGCTTCGCTAA
AACAGGGGCAGGCGGAATGTATCGAAGTGATTGCGCACGGCGATCAGGAATCGTCCAAGGTAGTCGGCAGAACGATACGA
GAATTAAAATTGCCGCAGGGAGCGGTTGTCGGTGCGATAGTGCGTCGCGATGAAGTGTTAATTGCGCATAAATCGACGGA
AATTGAAGAAAACGACAGCGTGATTATCTTTGTAAACGATAAAAAACAAGTGGGTGAAATTGAGAAATTATTCCAATTAG
GCACATTTTTCTTATAG

Upstream 100 bases:

>100_bases
CAAGAACAGGGCGGTGACGGTTTCTTTTATGCGAAATTAATCAAACAATAAATTACCGTAAGATAAAGATGTATTTATCT
TTCAGTGATTGGATTTTAAG

Downstream 100 bases:

>100_bases
AGCAAACAGACGTAAAAAAACCGACCCTTCGGTCGGTTCTTTTATACAAAAAGCAATTACGCTAATTTTTTGATTTGAGC
TGCTAATTTCGCTTTGTGGT

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKIIILGAGQVGSTLAENLVSEDNDITLIDDDQSRLNTLQDKHDLQVLKGNGASPRILRDAGAGDADLLVAVTESDETNM
IACQIAHTLFHIPTKIARIRNSDYVREKDQLFNDAALPIDHIIAPEVLVKKEILRLINYPGALQVAHFANELVSLVSVKA
YYGGPLVGYPISALRDHLPYIEARVVAIFRQERAILPQGSTIIEAGDEVFFICATHNIKAVMSEMQRLDKPHKRVMIVGG
GSIGMGLAKDLEEQYSVKMIEREPKRAEKLAQKLEKTLVLCGDASDQELLFEEHIENIDLFLALSGDDEANIMSALLAKR
LGAQKAIVLVQRTAYLHLIQGGTIDIALSPKQATISALSSHVRKGDIVQVASLKQGQAECIEVIAHGDQESSKVVGRTIR
ELKLPQGAVVGAIVRRDEVLIAHKSTEIEENDSVIIFVNDKKQVGEIEKLFQLGTFFL

Sequences:

>Translated_458_residues
MKIIILGAGQVGSTLAENLVSEDNDITLIDDDQSRLNTLQDKHDLQVLKGNGASPRILRDAGAGDADLLVAVTESDETNM
IACQIAHTLFHIPTKIARIRNSDYVREKDQLFNDAALPIDHIIAPEVLVKKEILRLINYPGALQVAHFANELVSLVSVKA
YYGGPLVGYPISALRDHLPYIEARVVAIFRQERAILPQGSTIIEAGDEVFFICATHNIKAVMSEMQRLDKPHKRVMIVGG
GSIGMGLAKDLEEQYSVKMIEREPKRAEKLAQKLEKTLVLCGDASDQELLFEEHIENIDLFLALSGDDEANIMSALLAKR
LGAQKAIVLVQRTAYLHLIQGGTIDIALSPKQATISALSSHVRKGDIVQVASLKQGQAECIEVIAHGDQESSKVVGRTIR
ELKLPQGAVVGAIVRRDEVLIAHKSTEIEENDSVIIFVNDKKQVGEIEKLFQLGTFFL
>Mature_458_residues
MKIIILGAGQVGSTLAENLVSEDNDITLIDDDQSRLNTLQDKHDLQVLKGNGASPRILRDAGAGDADLLVAVTESDETNM
IACQIAHTLFHIPTKIARIRNSDYVREKDQLFNDAALPIDHIIAPEVLVKKEILRLINYPGALQVAHFANELVSLVSVKA
YYGGPLVGYPISALRDHLPYIEARVVAIFRQERAILPQGSTIIEAGDEVFFICATHNIKAVMSEMQRLDKPHKRVMIVGG
GSIGMGLAKDLEEQYSVKMIEREPKRAEKLAQKLEKTLVLCGDASDQELLFEEHIENIDLFLALSGDDEANIMSALLAKR
LGAQKAIVLVQRTAYLHLIQGGTIDIALSPKQATISALSSHVRKGDIVQVASLKQGQAECIEVIAHGDQESSKVVGRTIR
ELKLPQGAVVGAIVRRDEVLIAHKSTEIEENDSVIIFVNDKKQVGEIEKLFQLGTFFL

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=458, Percent_Identity=63.7554585152838, Blast_Score=617, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 50261; Mature: 50261

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIILGAGQVGSTLAENLVSEDNDITLIDDDQSRLNTLQDKHDLQVLKGNGASPRILRD
CEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCEEEEECCCCCCCEEEC
AGAGDADLLVAVTESDETNMIACQIAHTLFHIPTKIARIRNSDYVREKDQLFNDAALPID
CCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH
HIIAPEVLVKKEILRLINYPGALQVAHFANELVSLVSVKAYYGGPLVGYPISALRDHLPY
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
IEARVVAIFRQERAILPQGSTIIEAGDEVFFICATHNIKAVMSEMQRLDKPHKRVMIVGG
HHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEC
GSIGMGLAKDLEEQYSVKMIEREPKRAEKLAQKLEKTLVLCGDASDQELLFEEHIENIDL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCEEE
FLALSGDDEANIMSALLAKRLGAQKAIVLVQRTAYLHLIQGGTIDIALSPKQATISALSS
EEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCEEEEEECCCHHHHHHHHH
HVRKGDIVQVASLKQGQAECIEVIAHGDQESSKVVGRTIRELKLPQGAVVGAIVRRDEVL
HCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEE
IAHKSTEIEENDSVIIFVNDKKQVGEIEKLFQLGTFFL
EEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIIILGAGQVGSTLAENLVSEDNDITLIDDDQSRLNTLQDKHDLQVLKGNGASPRILRD
CEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCEEEEECCCCCCCEEEC
AGAGDADLLVAVTESDETNMIACQIAHTLFHIPTKIARIRNSDYVREKDQLFNDAALPID
CCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH
HIIAPEVLVKKEILRLINYPGALQVAHFANELVSLVSVKAYYGGPLVGYPISALRDHLPY
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
IEARVVAIFRQERAILPQGSTIIEAGDEVFFICATHNIKAVMSEMQRLDKPHKRVMIVGG
HHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEC
GSIGMGLAKDLEEQYSVKMIEREPKRAEKLAQKLEKTLVLCGDASDQELLFEEHIENIDL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCEEE
FLALSGDDEANIMSALLAKRLGAQKAIVLVQRTAYLHLIQGGTIDIALSPKQATISALSS
EEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCEEEEEECCCHHHHHHHHH
HVRKGDIVQVASLKQGQAECIEVIAHGDQESSKVVGRTIRELKLPQGAVVGAIVRRDEVL
HCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEE
IAHKSTEIEENDSVIIFVNDKKQVGEIEKLFQLGTFFL
EEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]