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The map label for this gene is ydgR [C]

Identifier: 126209020

GI number: 126209020

Start: 1779339

End: 1780406

Strand: Reverse

Name: ydgR [C]

Synonym: APL_1556

Alternate gene names: 126209020

Gene position: 1780406-1779339 (Counterclockwise)

Preceding gene: 126209021

Following gene: 126209018

Centisome position: 78.28

GC content: 40.45

Gene sequence:

>1068_bases
ATGAACGTGCAGAATATTATTTTATGGAGACGCTTTTTTTCCGGACTCGCTTATACGGCGATGCAAAGTGTGTTTTTTAT
TTATTTAATGAAACACAAAGGCTTTGATACGGCACAAATCGCCAGCGCATTTTCTTTATTGGTGTTTGCCAGTCAGGCTT
TTTCTCTGTTTGCCGGCTCGTGGGGAGATCGTTACGGACGAACGCCGGTGATGATGTTAGGTTGTTTACTGGATGCGTTG
GGCTATATTTTATTGCTTACCACAAACCACTACGGTTTATTACTGCTGGCAACATTTTGTTTCGGGTTAGGCAGTACGCT
ATTTAGTACGAATGCGCGCGCTTTTCTGCTTTCCAATGCCGACGACGGTTATGCGTCTAAGACCAAGGCGCAAGGTAAAT
TCCTTAAAATCTCCAGTATGGCGTCTATGGTCGCTCCGTTAATTTCCATTCCGTTTATTCATTATCAAAAAGCGGAATGG
CTTATTTGGTGTTGCTGTGCGATTGAAGTCGTTATGTTACTTTTTATGTGGCGAATGATGCCGAGAAGGAAATGCGATTT
TCGTTTTGCGCCTTTCCGCTTTGCGCAGTTTAAAGAGATAATTAACAAGCGGTTTATTTTCGTCCATTTATTGCTATTTA
TTCCGTTAGGAATGGGCTCGGCGTTTTATGTGATTTTTCCGTATATTTTTACCGAATTGTTGGATAGACAAGAATTGGTG
CCGATTGCGTTTTTTATCAATAATTTAATTGCGGTACTGCTACAAACCGGTTTTTCACGTCATATTAATTTCGGGGTGAT
AAAACTGAATTATATTGCGCCGATTTTGATTGTATTATTGATTGTGCCGTGGTTTTACGCACTGGAATATTTGTCCGAGG
CGACGGCGTTTTTATATTTGGTTATTTTTGCGTTGGTCGGGTTATTTGCAAATACGGCACTCGCCAATATGTTAGTGAAA
TTGGATAGAGGCGAGAATCAGGGGCTGATGTTCGGTTTATCCAAATTGATTCTAGCGATAACTACCGCCGCTATTATGAA
TATTTTGCCGTATATCTTTTTAGTTTAA

Upstream 100 bases:

>100_bases
TTAATCGTACTGGCGGCGATCGTGTATTTTAGTTCGCTATTTGTATTGGGTATTCGTAAGAGAGATTTTCGATCTGCATA
AAAGAAAAAGGATATAACGT

Downstream 100 bases:

>100_bases
ATGGCAATCCGCCCTCAACACGAATCGTCGCTTGAGGGCGGATAAAGGCGTTAATTATAATTGAGCAAAGGCTTTGTCCG
CCGCTGCTAGAGTCGCTTGA

Product: putative transport system permease protein

Products: NA

Alternate protein names: MFS Family Facilitator Transporter; Multidrug Resistance Protein MdtH

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNVQNIILWRRFFSGLAYTAMQSVFFIYLMKHKGFDTAQIASAFSLLVFASQAFSLFAGSWGDRYGRTPVMMLGCLLDAL
GYILLLTTNHYGLLLLATFCFGLGSTLFSTNARAFLLSNADDGYASKTKAQGKFLKISSMASMVAPLISIPFIHYQKAEW
LIWCCCAIEVVMLLFMWRMMPRRKCDFRFAPFRFAQFKEIINKRFIFVHLLLFIPLGMGSAFYVIFPYIFTELLDRQELV
PIAFFINNLIAVLLQTGFSRHINFGVIKLNYIAPILIVLLIVPWFYALEYLSEATAFLYLVIFALVGLFANTALANMLVK
LDRGENQGLMFGLSKLILAITTAAIMNILPYIFLV

Sequences:

>Translated_355_residues
MNVQNIILWRRFFSGLAYTAMQSVFFIYLMKHKGFDTAQIASAFSLLVFASQAFSLFAGSWGDRYGRTPVMMLGCLLDAL
GYILLLTTNHYGLLLLATFCFGLGSTLFSTNARAFLLSNADDGYASKTKAQGKFLKISSMASMVAPLISIPFIHYQKAEW
LIWCCCAIEVVMLLFMWRMMPRRKCDFRFAPFRFAQFKEIINKRFIFVHLLLFIPLGMGSAFYVIFPYIFTELLDRQELV
PIAFFINNLIAVLLQTGFSRHINFGVIKLNYIAPILIVLLIVPWFYALEYLSEATAFLYLVIFALVGLFANTALANMLVK
LDRGENQGLMFGLSKLILAITTAAIMNILPYIFLV
>Mature_355_residues
MNVQNIILWRRFFSGLAYTAMQSVFFIYLMKHKGFDTAQIASAFSLLVFASQAFSLFAGSWGDRYGRTPVMMLGCLLDAL
GYILLLTTNHYGLLLLATFCFGLGSTLFSTNARAFLLSNADDGYASKTKAQGKFLKISSMASMVAPLISIPFIHYQKAEW
LIWCCCAIEVVMLLFMWRMMPRRKCDFRFAPFRFAQFKEIINKRFIFVHLLLFIPLGMGSAFYVIFPYIFTELLDRQELV
PIAFFINNLIAVLLQTGFSRHINFGVIKLNYIAPILIVLLIVPWFYALEYLSEATAFLYLVIFALVGLFANTALANMLVK
LDRGENQGLMFGLSKLILAITTAAIMNILPYIFLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40321; Mature: 40321

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50850 MFS ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQNIILWRRFFSGLAYTAMQSVFFIYLMKHKGFDTAQIASAFSLLVFASQAFSLFAGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
WGDRYGRTPVMMLGCLLDALGYILLLTTNHYGLLLLATFCFGLGSTLFSTNARAFLLSNA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
DDGYASKTKAQGKFLKISSMASMVAPLISIPFIHYQKAEWLIWCCCAIEVVMLLFMWRMM
CCCCCCHHHCCCCEEEHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHC
PRRKCDFRFAPFRFAQFKEIINKRFIFVHLLLFIPLGMGSAFYVIFPYIFTELLDRQELV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHH
PIAFFINNLIAVLLQTGFSRHINFGVIKLNYIAPILIVLLIVPWFYALEYLSEATAFLYL
HHHHHHHHHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFALVGLFANTALANMLVKLDRGENQGLMFGLSKLILAITTAAIMNILPYIFLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVQNIILWRRFFSGLAYTAMQSVFFIYLMKHKGFDTAQIASAFSLLVFASQAFSLFAGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
WGDRYGRTPVMMLGCLLDALGYILLLTTNHYGLLLLATFCFGLGSTLFSTNARAFLLSNA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
DDGYASKTKAQGKFLKISSMASMVAPLISIPFIHYQKAEWLIWCCCAIEVVMLLFMWRMM
CCCCCCHHHCCCCEEEHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHC
PRRKCDFRFAPFRFAQFKEIINKRFIFVHLLLFIPLGMGSAFYVIFPYIFTELLDRQELV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHH
PIAFFINNLIAVLLQTGFSRHINFGVIKLNYIAPILIVLLIVPWFYALEYLSEATAFLYL
HHHHHHHHHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFALVGLFANTALANMLVKLDRGENQGLMFGLSKLILAITTAAIMNILPYIFLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA