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The map label for this gene is yfiH [C]

Identifier: 126207915

GI number: 126207915

Start: 487394

End: 488131

Strand: Direct

Name: yfiH [C]

Synonym: APL_0431

Alternate gene names: 126207915

Gene position: 487394-488131 (Clockwise)

Preceding gene: 126207914

Following gene: 126207916

Centisome position: 21.43

GC content: 45.93

Gene sequence:

>738_bases
ATGAAAAACATTACGCCCAATTGGCATGCGCTGGAACATATTCGTGCTTTTACTACCGTTAGAACAGGTGGTGTTAGCCA
ACCCCCTTTTGATAGCTTTAATTTAGGTGATCATGTCGCTGATAATCCTAAGGATGTGAAACAAAATCGCCGGTTATTGG
TAGAGCAGTTCGGCTTGCCGCATTTTCCGCTATTTTTAACGCAAACACACAGTACTCGTGTGATTCGCCTACCGTATGAC
GGTGATAATTTGGAAGCGGATGCGGTTTATACCGATCAACCGAATCAGGTTTGCTTAGTGATGACGGCAGATTGTTTGCC
GGTGCTTTTCTATAGTAAAGACGGAAAAGAAGTCGCGGCGGCTCATGCCGGATGGCGAGGCTTGTGCGATGGTGTATTAG
AAAATACGGTAGCGGAATTTGCTTGTTCGCCGACGGATATTTGTGCATGGTTAGGGCCGGCAATCGGTCCAACTAAATTC
CAAGTCGGCAAAGAAGTGATTGAACAGTTTTGTGCCTTTGATCCGCAAGCGGAGCAGGCATTTGTTGTTGACCCGACAGC
AAGCGGTAAATTTTTAGGAAATCTTTACCAAATTGCTCGGCAGCGATTACGTAAACTTGGCATTACCGAAATTTCCGGCG
GAGAGCATTGTACCGTGACTGAACGGGAAGATTTTTTCTCTTATCGACGAGATAAACGGACAGGACGTATGGCAAGCCTT
ATTTGGCGTACGGAATAA

Upstream 100 bases:

>100_bases
TTCTTGCGTTGAAGTCGCTCGTTTACCGAAAGATGTCGGTTTAGAGATTGAAGCGATTGCGGTACGCAAATAAGCGGTCA
TTTTTAGAGAAAATTTTGCA

Downstream 100 bases:

>100_bases
AGTGTAATTTATTCGCTAGTATGTTTTTTATGCGGGTGTTTGCCTAACGCTAGACGAACACCCAAAATTTCCCTATAATC
CAACCTCATTTCTTTATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKNITPNWHALEHIRAFTTVRTGGVSQPPFDSFNLGDHVADNPKDVKQNRRLLVEQFGLPHFPLFLTQTHSTRVIRLPYD
GDNLEADAVYTDQPNQVCLVMTADCLPVLFYSKDGKEVAAAHAGWRGLCDGVLENTVAEFACSPTDICAWLGPAIGPTKF
QVGKEVIEQFCAFDPQAEQAFVVDPTASGKFLGNLYQIARQRLRKLGITEISGGEHCTVTEREDFFSYRRDKRTGRMASL
IWRTE

Sequences:

>Translated_245_residues
MKNITPNWHALEHIRAFTTVRTGGVSQPPFDSFNLGDHVADNPKDVKQNRRLLVEQFGLPHFPLFLTQTHSTRVIRLPYD
GDNLEADAVYTDQPNQVCLVMTADCLPVLFYSKDGKEVAAAHAGWRGLCDGVLENTVAEFACSPTDICAWLGPAIGPTKF
QVGKEVIEQFCAFDPQAEQAFVVDPTASGKFLGNLYQIARQRLRKLGITEISGGEHCTVTEREDFFSYRRDKRTGRMASL
IWRTE
>Mature_245_residues
MKNITPNWHALEHIRAFTTVRTGGVSQPPFDSFNLGDHVADNPKDVKQNRRLLVEQFGLPHFPLFLTQTHSTRVIRLPYD
GDNLEADAVYTDQPNQVCLVMTADCLPVLFYSKDGKEVAAAHAGWRGLCDGVLENTVAEFACSPTDICAWLGPAIGPTKF
QVGKEVIEQFCAFDPQAEQAFVVDPTASGKFLGNLYQIARQRLRKLGITEISGGEHCTVTEREDFFSYRRDKRTGRMASL
IWRTE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=234, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI190194372, Length=234, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1788945, Length=244, Percent_Identity=54.0983606557377, Blast_Score=259, Evalue=8e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27447; Mature: 27447

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNITPNWHALEHIRAFTTVRTGGVSQPPFDSFNLGDHVADNPKDVKQNRRLLVEQFGLP
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
HFPLFLTQTHSTRVIRLPYDGDNLEADAVYTDQPNQVCLVMTADCLPVLFYSKDGKEVAA
CCEEEEEECCCCEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCHHHH
AHAGWRGLCDGVLENTVAEFACSPTDICAWLGPAIGPTKFQVGKEVIEQFCAFDPQAEQA
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FVVDPTASGKFLGNLYQIARQRLRKLGITEISGGEHCTVTEREDFFSYRRDKRTGRMASL
EEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCHHHHHHHHHHHHCCHHHHE
IWRTE
EEECC
>Mature Secondary Structure
MKNITPNWHALEHIRAFTTVRTGGVSQPPFDSFNLGDHVADNPKDVKQNRRLLVEQFGLP
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
HFPLFLTQTHSTRVIRLPYDGDNLEADAVYTDQPNQVCLVMTADCLPVLFYSKDGKEVAA
CCEEEEEECCCCEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCHHHH
AHAGWRGLCDGVLENTVAEFACSPTDICAWLGPAIGPTKFQVGKEVIEQFCAFDPQAEQA
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FVVDPTASGKFLGNLYQIARQRLRKLGITEISGGEHCTVTEREDFFSYRRDKRTGRMASL
EEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCHHHHHHHHHHHHCCHHHHE
IWRTE
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]