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The map label for this gene is yjgF [C]

Identifier: 126207914

GI number: 126207914

Start: 486977

End: 487366

Strand: Direct

Name: yjgF [C]

Synonym: APL_0430

Alternate gene names: 126207914

Gene position: 486977-487366 (Clockwise)

Preceding gene: 126207909

Following gene: 126207915

Centisome position: 21.41

GC content: 42.31

Gene sequence:

>390_bases
ATGACTAAAGTTATTCATACGGAAAAAGCACCGGCGGCAATCGGTCCATACGTACAAGCGGTTGATTTAGGTAATTTGGT
TCTAACATCAGGACAAATTCCGGTTAATCCGCAAACGGGCGAGATTCCAACTGATATTACGCAACAAGCGCGCCAATCAT
TAGAAAATGTCAAAGCGATTGTTGAACAAGCCGGTTTAAGTGTGGCGGATATTGTTAAAACAACCGTTTTTGTCAAAGAC
CTAAATGATTTCGCAACCGTTAATGCTGAATATGAAGCGTTTTTCCGTGAAAATAATCATCCGACATTTCCGGCGCGTTC
TTGCGTTGAAGTCGCTCGTTTACCGAAAGATGTCGGTTTAGAGATTGAAGCGATTGCGGTACGCAAATAA

Upstream 100 bases:

>100_bases
ATGCTCATACTATTTCTCTTGAGATTAGGGGTAGAAATAAAAGGTGGGAGATATTATCATTAAACGCACTATTTTTCATT
ACTAAAAGAAGGAATTCACT

Downstream 100 bases:

>100_bases
GCGGTCATTTTTAGAGAAAATTTTGCAATGAAAAACATTACGCCCAATTGGCATGCGCTGGAACATATTCGTGCTTTTAC
TACCGTTAGAACAGGTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTKVIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPQTGEIPTDITQQARQSLENVKAIVEQAGLSVADIVKTTVFVKD
LNDFATVNAEYEAFFRENNHPTFPARSCVEVARLPKDVGLEIEAIAVRK

Sequences:

>Translated_129_residues
MTKVIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPQTGEIPTDITQQARQSLENVKAIVEQAGLSVADIVKTTVFVKD
LNDFATVNAEYEAFFRENNHPTFPARSCVEVARLPKDVGLEIEAIAVRK
>Mature_128_residues
TKVIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPQTGEIPTDITQQARQSLENVKAIVEQAGLSVADIVKTTVFVKDL
NDFATVNAEYEAFFRENNHPTFPARSCVEVARLPKDVGLEIEAIAVRK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=127, Percent_Identity=44.0944881889764, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI87082396, Length=129, Percent_Identity=79.8449612403101, Blast_Score=211, Evalue=1e-56,
Organism=Escherichia coli, GI87082213, Length=128, Percent_Identity=71.09375, Blast_Score=186, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI25148896, Length=125, Percent_Identity=40, Blast_Score=105, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71982075, Length=125, Percent_Identity=40, Blast_Score=105, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71982068, Length=125, Percent_Identity=40, Blast_Score=105, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6322138, Length=125, Percent_Identity=42.4, Blast_Score=97, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6320899, Length=107, Percent_Identity=41.1214953271028, Blast_Score=85, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19921376, Length=126, Percent_Identity=42.0634920634921, Blast_Score=96, Evalue=8e-21,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13999; Mature: 13868

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPQTGEIPTDITQQARQSLENVKAI
CCCCCCCCCCCCCCCCHHEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VEQAGLSVADIVKTTVFVKDLNDFATVNAEYEAFFRENNHPTFPARSCVEVARLPKDVGL
HHHHCCCHHHHHHHHHHHHHCHHHHCCCCHHHHEEECCCCCCCCHHHHHHHHHCCHHCCC
EIEAIAVRK
EEEEEEECC
>Mature Secondary Structure 
TKVIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPQTGEIPTDITQQARQSLENVKAI
CCCCCCCCCCCCCCCHHEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VEQAGLSVADIVKTTVFVKDLNDFATVNAEYEAFFRENNHPTFPARSCVEVARLPKDVGL
HHHHCCCHHHHHHHHHHHHHCHHHHCCCCHHHHEEECCCCCCCCHHHHHHHHHCCHHCCC
EIEAIAVRK
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]