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The map label for this gene is ycjF [C]

Identifier: 126207792

GI number: 126207792

Start: 340397

End: 341443

Strand: Direct

Name: ycjF [C]

Synonym: APL_0308

Alternate gene names: 126207792

Gene position: 340397-341443 (Clockwise)

Preceding gene: 126207791

Following gene: 126207794

Centisome position: 14.97

GC content: 40.21

Gene sequence:

>1047_bases
ATGAAGAAACAAATATTTAGTGAGCAAGAGATCACAACAGAGCAGCAATTTGTCGCCAAGCAAGAATTTGAGGCTTCGGA
CGATATTCAAATTGAAGAAGAATATCAAGAAGTTGAGGCGGAATTAATTGTTGAAGAAAGCCTAAAACCTTCACGTTTTT
GGGTAAGAGTATTACTGTTTGCGTTAGGGCTGTTTAGTGTTGCCGTGATTGCACAAAGCGTACAATGGTTGATTGACACC
TTCCAAGCTCGTCAATGGATTTATTTTGCGTTTGCGATTGTGTTCGCCTTAATCAGTTTAACCGGTGTAGTTGCGATTAT
CGGTGAATGGCGGAAGTTAGTTTTTTTACGTCATCACCAGCAACAACAGCAAGTAAGCGAACAATTACTTTTAGAAGAAC
TTTCAACGACAAGCGGTGAAAAAGCGGTAAATTTTTGCAATGAGGTTGTAGCTAATTTAAAAAATGTGCCAAGTGTACAA
CATTCGCAACAGCGTTGGCAAAGCCAATTAAATGAGGCTTACAACGCAAAAGAAGTGCTTTATCTATTTAGTGAAACAGT
GCTCACACCGCTTGATAAGCAAGTGAAAAAAATGATTTCAAAAAGTGCGACTGAAAATGCCGTTATTGTAGCGGTTAGCC
CGTTAGCGGTGGTCGATGTGTTGATGGTCGCATGGCGAAATATTGCATTAGTCAATAAAATTAGCAAAACCTACGGTATG
CAATTAGGTTATTTCAGCCGTTTGAAATTATTCAAAATGGTTTTAACCAATATGGTGTTTGCCGGTGCAACCGAAGTGGT
GAGCGATGTTGGTATGGAATTCTTCTCACAGAATTTAACCGCTAAACTTTCACTGCGTGCCGCACAAGGGATTGGGGTTG
GCTTATTAACCGCAAGATTAGGCATTAAAGCGATGGAGTTTTGCCGTCCGGTTGCTTTCCAAGCAGGCGAAAAACCGAAA
CTTTCTGCCATTCGCCAACAATTATTAACTTCGGTTAAAAACACGATTTTTGCGAAAGCAGAAGAAAAAGTGAGTGAGAA
GGTATAG

Upstream 100 bases:

>100_bases
TGACGGTCTAAAAACGCATATTGAACGAGCGGTAAATCAAGAGTTTTAACCACGGAAAACACTATTAGCATTATCCGTGC
TTAATTGAAAAGAGAAAATG

Downstream 100 bases:

>100_bases
ATATTTCGTGGCTTAGTGTTTTAATCGCCACGGAATGTATGGAAATGAAAATAAGCGGTAGGATTTGCAAAAAAAGTTGC
AAATCCTACCGCTTGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKKQIFSEQEITTEQQFVAKQEFEASDDIQIEEEYQEVEAELIVEESLKPSRFWVRVLLFALGLFSVAVIAQSVQWLIDT
FQARQWIYFAFAIVFALISLTGVVAIIGEWRKLVFLRHHQQQQQVSEQLLLEELSTTSGEKAVNFCNEVVANLKNVPSVQ
HSQQRWQSQLNEAYNAKEVLYLFSETVLTPLDKQVKKMISKSATENAVIVAVSPLAVVDVLMVAWRNIALVNKISKTYGM
QLGYFSRLKLFKMVLTNMVFAGATEVVSDVGMEFFSQNLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQAGEKPK
LSAIRQQLLTSVKNTIFAKAEEKVSEKV

Sequences:

>Translated_348_residues
MKKQIFSEQEITTEQQFVAKQEFEASDDIQIEEEYQEVEAELIVEESLKPSRFWVRVLLFALGLFSVAVIAQSVQWLIDT
FQARQWIYFAFAIVFALISLTGVVAIIGEWRKLVFLRHHQQQQQVSEQLLLEELSTTSGEKAVNFCNEVVANLKNVPSVQ
HSQQRWQSQLNEAYNAKEVLYLFSETVLTPLDKQVKKMISKSATENAVIVAVSPLAVVDVLMVAWRNIALVNKISKTYGM
QLGYFSRLKLFKMVLTNMVFAGATEVVSDVGMEFFSQNLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQAGEKPK
LSAIRQQLLTSVKNTIFAKAEEKVSEKV
>Mature_348_residues
MKKQIFSEQEITTEQQFVAKQEFEASDDIQIEEEYQEVEAELIVEESLKPSRFWVRVLLFALGLFSVAVIAQSVQWLIDT
FQARQWIYFAFAIVFALISLTGVVAIIGEWRKLVFLRHHQQQQQVSEQLLLEELSTTSGEKAVNFCNEVVANLKNVPSVQ
HSQQRWQSQLNEAYNAKEVLYLFSETVLTPLDKQVKKMISKSATENAVIVAVSPLAVVDVLMVAWRNIALVNKISKTYGM
QLGYFSRLKLFKMVLTNMVFAGATEVVSDVGMEFFSQNLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQAGEKPK
LSAIRQQLLTSVKNTIFAKAEEKVSEKV

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=337, Percent_Identity=41.2462908011869, Blast_Score=251, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 39253; Mature: 39253

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQIFSEQEITTEQQFVAKQEFEASDDIQIEEEYQEVEAELIVEESLKPSRFWVRVLLF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALGLFSVAVIAQSVQWLIDTFQARQWIYFAFAIVFALISLTGVVAIIGEWRKLVFLRHHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQQVSEQLLLEELSTTSGEKAVNFCNEVVANLKNVPSVQHSQQRWQSQLNEAYNAKEVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHH
YLFSETVLTPLDKQVKKMISKSATENAVIVAVSPLAVVDVLMVAWRNIALVNKISKTYGM
HHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLGYFSRLKLFKMVLTNMVFAGATEVVSDVGMEFFSQNLTAKLSLRAAQGIGVGLLTARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHH
GIKAMEFCRPVAFQAGEKPKLSAIRQQLLTSVKNTIFAKAEEKVSEKV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKQIFSEQEITTEQQFVAKQEFEASDDIQIEEEYQEVEAELIVEESLKPSRFWVRVLLF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALGLFSVAVIAQSVQWLIDTFQARQWIYFAFAIVFALISLTGVVAIIGEWRKLVFLRHHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQQVSEQLLLEELSTTSGEKAVNFCNEVVANLKNVPSVQHSQQRWQSQLNEAYNAKEVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHH
YLFSETVLTPLDKQVKKMISKSATENAVIVAVSPLAVVDVLMVAWRNIALVNKISKTYGM
HHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLGYFSRLKLFKMVLTNMVFAGATEVVSDVGMEFFSQNLTAKLSLRAAQGIGVGLLTARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHH
GIKAMEFCRPVAFQAGEKPKLSAIRQQLLTSVKNTIFAKAEEKVSEKV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA