Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is 126207604

Identifier: 126207604

GI number: 126207604

Start: 133224

End: 133808

Strand: Direct

Name: 126207604

Synonym: APL_0116

Alternate gene names: NA

Gene position: 133224-133808 (Clockwise)

Preceding gene: 126207602

Following gene: 126207605

Centisome position: 5.86

GC content: 38.46

Gene sequence:

>585_bases
ATGAAAAAACTGATGAAACCGATTTTTGTCTGCTTAACCTTGGCGGTTCTGACCGCTTGTTCGAGTAAAAGTAGTTGGAC
TCGTTTAAACGATTCGGAAGTAGATCAAAAATCCTATGCGATAGCTTATGGCGCAACGGCACAAACTTACGCGGATCGAG
TAAATGAAAGTTATGATATCGATTCATTTATGAACGGTGTTGATGATTGGTATAACAAAAAAGTTAATCTGCCGGTAGAA
CAAATTCGAGCAATGATTTTGAATCGCTTAATGGATCATAATATTTACGCTTATTATAGCGGTGTGCTTTATGCTGCGGA
TTTACAAGGCAATTTTAATCATTTGGATCCAAGTTGTTGGGATTTGGTACAAACGCCGAGTATGACGCAAGGTATCCACG
ATGCAATGCTTGATATTCAAAAAAATAAGGTACGTGGCGACGAATATATTAAAAACGGAGTGGAACAAATTCTTCATCTT
TGCGTGAAAACGATGGTGGAAGACGAGCATAAGCAGGAAGTTAATTCAAAAGCTAAAGGCAAAAAATCGGCGAAAGCGGC
TCAGAAACAGAAATCGGCTAAATAA

Upstream 100 bases:

>100_bases
AATACTGTTTCATGGTGACCTCTTAAAAAAACTTAGGTAATTTTGCCATTTATTCGGTAAAATGGATAATAAATTTTTAT
AAAGCGATAAGGAGTGCGAT

Downstream 100 bases:

>100_bases
CGTCAGTTAATGTATTGTATAAGCGGTCTATTTTTCTCAATAAATTGTAAGATTTTGAGAAAATACGACCGCTTCGGTTT
ATTTAAGGAGATGACATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDIDSFMNGVDDWYNKKVNLPVE
QIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCWDLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHL
CVKTMVEDEHKQEVNSKAKGKKSAKAAQKQKSAK

Sequences:

>Translated_194_residues
MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDIDSFMNGVDDWYNKKVNLPVE
QIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCWDLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHL
CVKTMVEDEHKQEVNSKAKGKKSAKAAQKQKSAK
>Mature_194_residues
MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDIDSFMNGVDDWYNKKVNLPVE
QIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCWDLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHL
CVKTMVEDEHKQEVNSKAKGKKSAKAAQKQKSAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21978; Mature: 21978

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCHHHHHHHHCCCCCCH
DSFMNGVDDWYNKKVNLPVEQIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCW
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCCHHHH
DLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHLCVKTMVEDEHKQEVNSKAKG
HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KKSAKAAQKQKSAK
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCHHHHHHHHCCCCCCH
DSFMNGVDDWYNKKVNLPVEQIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCW
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCCHHHH
DLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHLCVKTMVEDEHKQEVNSKAKG
HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KKSAKAAQKQKSAK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]