Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207604
Identifier: 126207604
GI number: 126207604
Start: 133224
End: 133808
Strand: Direct
Name: 126207604
Synonym: APL_0116
Alternate gene names: NA
Gene position: 133224-133808 (Clockwise)
Preceding gene: 126207602
Following gene: 126207605
Centisome position: 5.86
GC content: 38.46
Gene sequence:
>585_bases ATGAAAAAACTGATGAAACCGATTTTTGTCTGCTTAACCTTGGCGGTTCTGACCGCTTGTTCGAGTAAAAGTAGTTGGAC TCGTTTAAACGATTCGGAAGTAGATCAAAAATCCTATGCGATAGCTTATGGCGCAACGGCACAAACTTACGCGGATCGAG TAAATGAAAGTTATGATATCGATTCATTTATGAACGGTGTTGATGATTGGTATAACAAAAAAGTTAATCTGCCGGTAGAA CAAATTCGAGCAATGATTTTGAATCGCTTAATGGATCATAATATTTACGCTTATTATAGCGGTGTGCTTTATGCTGCGGA TTTACAAGGCAATTTTAATCATTTGGATCCAAGTTGTTGGGATTTGGTACAAACGCCGAGTATGACGCAAGGTATCCACG ATGCAATGCTTGATATTCAAAAAAATAAGGTACGTGGCGACGAATATATTAAAAACGGAGTGGAACAAATTCTTCATCTT TGCGTGAAAACGATGGTGGAAGACGAGCATAAGCAGGAAGTTAATTCAAAAGCTAAAGGCAAAAAATCGGCGAAAGCGGC TCAGAAACAGAAATCGGCTAAATAA
Upstream 100 bases:
>100_bases AATACTGTTTCATGGTGACCTCTTAAAAAAACTTAGGTAATTTTGCCATTTATTCGGTAAAATGGATAATAAATTTTTAT AAAGCGATAAGGAGTGCGAT
Downstream 100 bases:
>100_bases CGTCAGTTAATGTATTGTATAAGCGGTCTATTTTTCTCAATAAATTGTAAGATTTTGAGAAAATACGACCGCTTCGGTTT ATTTAAGGAGATGACATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDIDSFMNGVDDWYNKKVNLPVE QIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCWDLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHL CVKTMVEDEHKQEVNSKAKGKKSAKAAQKQKSAK
Sequences:
>Translated_194_residues MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDIDSFMNGVDDWYNKKVNLPVE QIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCWDLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHL CVKTMVEDEHKQEVNSKAKGKKSAKAAQKQKSAK >Mature_194_residues MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDIDSFMNGVDDWYNKKVNLPVE QIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCWDLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHL CVKTMVEDEHKQEVNSKAKGKKSAKAAQKQKSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21978; Mature: 21978
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDI CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCHHHHHHHHCCCCCCH DSFMNGVDDWYNKKVNLPVEQIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCW HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCCHHHH DLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHLCVKTMVEDEHKQEVNSKAKG HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KKSAKAAQKQKSAK HHHHHHHHHHHCCC >Mature Secondary Structure MKKLMKPIFVCLTLAVLTACSSKSSWTRLNDSEVDQKSYAIAYGATAQTYADRVNESYDI CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCHHHHHHHHCCCCCCH DSFMNGVDDWYNKKVNLPVEQIRAMILNRLMDHNIYAYYSGVLYAADLQGNFNHLDPSCW HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCCHHHH DLVQTPSMTQGIHDAMLDIQKNKVRGDEYIKNGVEQILHLCVKTMVEDEHKQEVNSKAKG HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KKSAKAAQKQKSAK HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]