| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is pyrG [H]
Identifier: 126175329
GI number: 126175329
Start: 3662823
End: 3664460
Strand: Reverse
Name: pyrG [H]
Synonym: Sbal_3128
Alternate gene names: 126175329
Gene position: 3664460-3662823 (Counterclockwise)
Preceding gene: 126175330
Following gene: 126175328
Centisome position: 71.47
GC content: 45.18
Gene sequence:
>1638_bases ATGACTACAAGGTATATCTTCGTTACTGGTGGCGTTGTTTCATCACTAGGTAAAGGCATTGCAGCAGCATCATTAGCTGC AATTTTAGAGGCCCGCGGTCTCAATGTAACCATCATGAAACTGGACCCTTACATTAACGTTGATCCGGGTACCATGAGCC CAACCCAACATGGCGAAGTATTTGTTACTGAAGACGGTGCAGAAACAGATCTCGACTTGGGTCACTACGAGCGTTTCATC CGTACTAAGATGAATCGTCGTAACAACTTCACTACCGGTCGAATTTACGAAGAAGTATTACGTAAAGAACGTCGTGGCGA TTATTTGGGCGCAACCATTCAGGTTATCCCACACATCACTAATGCGATTAAAGAAAAAGTATTAGCAGGTGGCGAAGGCC ATGATGTGGCTATCGTCGAAATCGGCGGTACTGTGGGTGATATCGAATCTTTGCCGTTCCTAGAGTCTATCCGTCAGCTC GGTGTTGAGCTAGGTCGTGATCGTACTCTGTTCATGCATTTAACCTTAGTGCCTTTCTTGGGTGCTGCTGGCGAAGTGAA AACTAAGCCAACTCAACACTCAGTGAAAGAGCTGCGTTCTATCGGTATTGCACCAGATGTGTTGGTTTGCCGTGGTGACC GTGCGATTCCTGCTAATGAAAAAGCCAAAATTTCGCTGTTCTGCAACGTCGAAGAGCGTGCGGTTATTTCATTAAAAGAT GTTGATAGTATTTATAAAATCCCAGCTTTGTTACGTTCACAAGGTTTGGATGACTTAGTGGTTAAGCGTTTCGGTTTAGA ATGCCGTGAAGCGGATCTGTCTGAGTGGGAAAATGTGATTTACCAAGAAGCTAATCCAAACGGCGAAGTCGTTATTGGTA TGGTGGGTAAATACATTGAACTGCCAGATGCCTATAAGTCAGTTAACGAAGCATTAAAACATGCTGGCCTTAAAAACCGC GTATCTGTGACTATCAAGTATATTGATTCACAAACCGTAGAAGCCAAAGGCGAAGAAGTCTTACAGGGCTTAGACGGTAT CTTAGTACCAGGCGGTTTTGGCGAGCGTGGTGTTGAAGGTAAGATACTGGCGGCGAAATTTGCCCGTGAAAACAATCTAC CGTATTTCGGTATTTGTTTAGGTATGCAAGTTGCCCTGATTGAATTTGCGCGTAATGTTGCAGGCATGGCCGATGCACAT TCAACTGAATTCAATAAAGAAACACCATTCCCAGTCGTGGGTTTGATCACTGAATGGATTGACGAAGAAGGTAACGTCGA GCAGCGCCATGAAGCGTCTGACTTAGGTGGCACTATGCGTTTAGGCGCTCAATTGTGTCATTTACTCGATGGTTCGAAAG CGGCTCAAGCCTACAAAGGCAATAGCTGTGTAGAACGTCACCGTCACCGTTATGAAGTGAACAACAAATACAGAGAGCGT TTAGAACAAGCTGGCATGATCTTCAGCGGTTTGTCTTCTGATCGTAAGCTGGTGGAAATGATCGAATTAAAAGATCACCC ATGGTTTGTTGCAGGTCAATTCCATCCTGAGTTCACCTCAACTCCGCGCGATGGTCACCCATTGTTCGAAGGGTTTATTG CTGCGGCAAGTGCGCATCAAAAACGTGATCTGAAGTAA
Upstream 100 bases:
>100_bases ATTGGTGTTTGTCGAATCGCGCCGCCTTTGGTATACTACTGCCCCGTCCTAGTGCTTTCTTACAAGCACGTATTTTCAAA CTCATTTTCTCAGGTTCAGC
Downstream 100 bases:
>100_bases GAATATTTGAGGCCGGACCCGCGACAGTGGGGCCGGCCTTTTGTTACACTCATCAGACTTGAAACATAAGAACTTAATAC CTCTGGGTATAAACAGTATG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHITNAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQL GVELGRDRTLFMHLTLVPFLGAAGEVKTKPTQHSVKELRSIGIAPDVLVCRGDRAIPANEKAKISLFCNVEERAVISLKD VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIELPDAYKSVNEALKHAGLKNR VSVTIKYIDSQTVEAKGEEVLQGLDGILVPGGFGERGVEGKILAAKFARENNLPYFGICLGMQVALIEFARNVAGMADAH STEFNKETPFPVVGLITEWIDEEGNVEQRHEASDLGGTMRLGAQLCHLLDGSKAAQAYKGNSCVERHRHRYEVNNKYRER LEQAGMIFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQKRDLK
Sequences:
>Translated_545_residues MTTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHITNAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQL GVELGRDRTLFMHLTLVPFLGAAGEVKTKPTQHSVKELRSIGIAPDVLVCRGDRAIPANEKAKISLFCNVEERAVISLKD VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIELPDAYKSVNEALKHAGLKNR VSVTIKYIDSQTVEAKGEEVLQGLDGILVPGGFGERGVEGKILAAKFARENNLPYFGICLGMQVALIEFARNVAGMADAH STEFNKETPFPVVGLITEWIDEEGNVEQRHEASDLGGTMRLGAQLCHLLDGSKAAQAYKGNSCVERHRHRYEVNNKYRER LEQAGMIFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQKRDLK >Mature_544_residues TTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIR TKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHITNAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQLG VELGRDRTLFMHLTLVPFLGAAGEVKTKPTQHSVKELRSIGIAPDVLVCRGDRAIPANEKAKISLFCNVEERAVISLKDV DSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIELPDAYKSVNEALKHAGLKNRV SVTIKYIDSQTVEAKGEEVLQGLDGILVPGGFGERGVEGKILAAKFARENNLPYFGICLGMQVALIEFARNVAGMADAHS TEFNKETPFPVVGLITEWIDEEGNVEQRHEASDLGGTMRLGAQLCHLLDGSKAAQAYKGNSCVERHRHRYEVNNKYRERL EQAGMIFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQKRDLK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=557, Percent_Identity=44.524236983842, Blast_Score=474, Evalue=1e-134, Organism=Homo sapiens, GI28559085, Length=560, Percent_Identity=43.9285714285714, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI28559083, Length=560, Percent_Identity=43.9285714285714, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI221316689, Length=560, Percent_Identity=43.9285714285714, Blast_Score=462, Evalue=1e-130, Organism=Escherichia coli, GI1789142, Length=545, Percent_Identity=77.6146788990826, Blast_Score=857, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=611, Percent_Identity=38.1342062193126, Blast_Score=418, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=43.4094903339192, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=41.4035087719298, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI24664469, Length=557, Percent_Identity=45.7809694793537, Blast_Score=479, Evalue=1e-135, Organism=Drosophila melanogaster, GI21357815, Length=503, Percent_Identity=44.5328031809145, Blast_Score=409, Evalue=1e-114,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60109; Mature: 59978
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEV CCEEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQLGVELGRDRTLFMHLTLVPFL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHC GAAGEVKTKPTQHSVKELRSIGIAPDVLVCRGDRAIPANEKAKISLFCNVEERAVISLKD CCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEHHH VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIE HHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHHHHHHHEECCCCCCCEEEEECCCHHC LPDAYKSVNEALKHAGLKNRVSVTIKYIDSQTVEAKGEEVLQGLDGILVPGGFGERGVEG CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCHHHHHHCCCCEEECCCCCCCCCCC KILAAKFARENNLPYFGICLGMQVALIEFARNVAGMADAHSTEFNKETPFPVVGLITEWI CEEEEEHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH DEEGNVEQRHEASDLGGTMRLGAQLCHLLDGSKAAQAYKGNSCVERHRHRYEVNNKYRER CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHH LEQAGMIFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQ HHHCCHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KRDLK HCCCC >Mature Secondary Structure TTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEV CEEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQLGVELGRDRTLFMHLTLVPFL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHC GAAGEVKTKPTQHSVKELRSIGIAPDVLVCRGDRAIPANEKAKISLFCNVEERAVISLKD CCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEHHH VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIE HHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHHHHHHHEECCCCCCCEEEEECCCHHC LPDAYKSVNEALKHAGLKNRVSVTIKYIDSQTVEAKGEEVLQGLDGILVPGGFGERGVEG CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCHHHHHHCCCCEEECCCCCCCCCCC KILAAKFARENNLPYFGICLGMQVALIEFARNVAGMADAHSTEFNKETPFPVVGLITEWI CEEEEEHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH DEEGNVEQRHEASDLGGTMRLGAQLCHLLDGSKAAQAYKGNSCVERHRHRYEVNNKYRER CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHH LEQAGMIFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQ HHHCCHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KRDLK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA