Click here to switch to the map view.

The map label for this gene is 126175194

Identifier: 126175194

GI number: 126175194

Start: 3519440

End: 3520228

Strand: Reverse

Name: 126175194

Synonym: Sbal_2992

Alternate gene names: NA

Gene position: 3520228-3519440 (Counterclockwise)

Preceding gene: 126175195

Following gene: 126175193

Centisome position: 68.66

GC content: 45.12

Gene sequence:

>789_bases
ATGAAGCATGGATTGCCAAGGTTTTCGTTGATTTTAACCCTGTCATTATTGATGACAGGGTGCGTCACTGAGCGTACTTA
TACTGGGACAGATATTCCTGTTTCGGAACGAAAGTTAGACAAAGTCGCCGCCGCGCGCGAGCGTTTGCAGCTCGGCTTAA
CCTATTTAAATCGAGGTAACTCGGAACAAGCCAAATACAATCTTGATAAAGCATTAGAGTATGCTCCAGAGCTCGAAGAT
GTGCATACTGCTTTGGCTTATTACTATCAAACCGTGGGCGATCTAGTACGTACCGAAGAGTCGTACATGAATGCCATTAG
TACCAAGGACGCCTCTGGCGATTCCATGAATAATTTCGGGGTGTTTTTGTGTCAACAAAAGCAATACGACAAAGCTGAAA
AAATGTTTTTGGCCGCAATCGAGATGCCTAAATATACGCGAACGGCCTCAAGCTACGAGAACTTAGGTCTCTGTAGCCGT
GAAGCAGGACAAGCAGAAAAGGCACGACAGTATTTTCAGATGGCGTTAAAGTATGACCCGAGAAGATCGGTGTCGTTGCT
GGAGATGGCAGAGTTAGAAGTCGACCAAGGTGATTTTATTCAGGCGCGAAACCAATTAGCGCGATATCACCAAGTGGCTG
AGCAAACTCCAGAAAGTTTAGCGCTCGGAATCAAAATAGAGCAGGCAGTGAATGATGATGCCGCTGTGAAGAGATTTGGT
ATTTTATTGCTTGCCAAATTCCCAGCATCACCTCAGGCCAAGCAATACAGAGTTAATTTGCATCAATGA

Upstream 100 bases:

>100_bases
GCGATAGAACGAAACGTTTAGCAAAAAAACGCATGCAAGAAAACCAGATTTCAGTCACAATGAATTAACTCTTTGTTTGC
ACAGATTTATAGGCTTGCCC

Downstream 100 bases:

>100_bases
AAGATCATGAAACCAATGCGCCAGTTGAGTCGGTAGCTCCGCAATCAGTCGCGCTAGATGTAACGCTTGGAACCTTATTA
AAAGACGCCCGCGAAAAAAT

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKHGLPRFSLILTLSLLMTGCVTERTYTGTDIPVSERKLDKVAAARERLQLGLTYLNRGNSEQAKYNLDKALEYAPELED
VHTALAYYYQTVGDLVRTEESYMNAISTKDASGDSMNNFGVFLCQQKQYDKAEKMFLAAIEMPKYTRTASSYENLGLCSR
EAGQAEKARQYFQMALKYDPRRSVSLLEMAELEVDQGDFIQARNQLARYHQVAEQTPESLALGIKIEQAVNDDAAVKRFG
ILLLAKFPASPQAKQYRVNLHQ

Sequences:

>Translated_262_residues
MKHGLPRFSLILTLSLLMTGCVTERTYTGTDIPVSERKLDKVAAARERLQLGLTYLNRGNSEQAKYNLDKALEYAPELED
VHTALAYYYQTVGDLVRTEESYMNAISTKDASGDSMNNFGVFLCQQKQYDKAEKMFLAAIEMPKYTRTASSYENLGLCSR
EAGQAEKARQYFQMALKYDPRRSVSLLEMAELEVDQGDFIQARNQLARYHQVAEQTPESLALGIKIEQAVNDDAAVKRFG
ILLLAKFPASPQAKQYRVNLHQ
>Mature_262_residues
MKHGLPRFSLILTLSLLMTGCVTERTYTGTDIPVSERKLDKVAAARERLQLGLTYLNRGNSEQAKYNLDKALEYAPELED
VHTALAYYYQTVGDLVRTEESYMNAISTKDASGDSMNNFGVFLCQQKQYDKAEKMFLAAIEMPKYTRTASSYENLGLCSR
EAGQAEKARQYFQMALKYDPRRSVSLLEMAELEVDQGDFIQARNQLARYHQVAEQTPESLALGIKIEQAVNDDAAVKRFG
ILLLAKFPASPQAKQYRVNLHQ

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29630; Mature: 29630

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHGLPRFSLILTLSLLMTGCVTERTYTGTDIPVSERKLDKVAAARERLQLGLTYLNRGN
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SEQAKYNLDKALEYAPELEDVHTALAYYYQTVGDLVRTEESYMNAISTKDASGDSMNNFG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VFLCQQKQYDKAEKMFLAAIEMPKYTRTASSYENLGLCSREAGQAEKARQYFQMALKYDP
EEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
RRSVSLLEMAELEVDQGDFIQARNQLARYHQVAEQTPESLALGIKIEQAVNDDAAVKRFG
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHEECEEEHHHCCCHHHHHHHH
ILLLAKFPASPQAKQYRVNLHQ
HHEEEECCCCCCCCCEEEECCC
>Mature Secondary Structure
MKHGLPRFSLILTLSLLMTGCVTERTYTGTDIPVSERKLDKVAAARERLQLGLTYLNRGN
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SEQAKYNLDKALEYAPELEDVHTALAYYYQTVGDLVRTEESYMNAISTKDASGDSMNNFG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VFLCQQKQYDKAEKMFLAAIEMPKYTRTASSYENLGLCSREAGQAEKARQYFQMALKYDP
EEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
RRSVSLLEMAELEVDQGDFIQARNQLARYHQVAEQTPESLALGIKIEQAVNDDAAVKRFG
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHEECEEEHHHCCCHHHHHHHH
ILLLAKFPASPQAKQYRVNLHQ
HHEEEECCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]