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The map label for this gene is rodZ [H]

Identifier: 126175193

GI number: 126175193

Start: 3518373

End: 3519443

Strand: Reverse

Name: rodZ [H]

Synonym: Sbal_2991

Alternate gene names: 126175193

Gene position: 3519443-3518373 (Counterclockwise)

Preceding gene: 126175194

Following gene: 126175192

Centisome position: 68.64

GC content: 49.49

Gene sequence:

>1071_bases
ATGAAAGATCATGAAACCAATGCGCCAGTTGAGTCGGTAGCTCCGCAATCAGTCGCGCTAGATGTAACGCTTGGAACCTT
ATTAAAAGACGCCCGCGAAAAAATGGGCCTTAGCATTCAAGATGCGGCGGTTAAACTGCATCTACGTCCTCGCATTATTG
AAGACATTGAAGCTGACAATTTTACCAATATCGCTTCATCCACTTATGTTCGTGGTTATGTGAAAAACTATGCCCGTATG
GTCAGTGCCGATGCGGCCTTGATTGAAGCGTGTTTAGTGCGGCAAGTGCCGGTGGTGACTGAGCCTGCGATGCAAAGCTT
TTCACGTAAGACGACTTACCAAGCTAGCGATACACGTTTAACTTGGTTGAGTATTTTTATCGTTATTGTGTTACTCGGCT
CGTTAGTCGTCTGGTGGATGCAAAAAACGACCTTGTTAAGCACTATCGATGTGTCACAGCCTACGGCCGAAGAGGTCGCT
GCGGTGAATCAAACGCTGCCCGGTGACGTGCTATTGACCGAAACTGATGCCAGCCAGCAATTGACTGAAATAGCGGCTAA
CGGCTCTATGTCAATCGACGGTCCGATTAAAGATACCGATGCCAGTACTATCGACGTGAGCACTGGGCCTACTGACAACA
ATTATCCTCAAACGGCGGATACGAGCAATGAAGATGGTGGCTCAGCTATCGCTGCCACCACTGGGCCGCAAACGGCCGCG
ACTGTAGCTCAACAATCTGTAGCTCAACAGCCAGTTGCCACCGCAAAGCCTTTACCTGCCTCAACATCGCCAGCCACCTC
AGTCAACACTCTGGTCGCTGTTGCTGGACAATCAATTATTGATGTTCAGTTAACCGGTGATTGCTGGATAAACATTGTCG
ATGCTAAAGGCAAAGCCTTAGTCGATGGTGTGAAAGGCGCTGGCGCTGCAGTGCAAGTGAGCGGTGTGCCACCGTTTAAA
ATTATTTTAGGGGCGCCCCATGTGGCGACCTTAAGCTTAGATGGTCAAATGGTTAGCTTAGCGGATTTCCCCAAGGGACG
TGTCGCACGTTTAACCTTGCCGAGAGCCTAA

Upstream 100 bases:

>100_bases
CAGTGAATGATGATGCCGCTGTGAAGAGATTTGGTATTTTATTGCTTGCCAAATTCCCAGCATCACCTCAGGCCAAGCAA
TACAGAGTTAATTTGCATCA

Downstream 100 bases:

>100_bases
CGACCGCGTAATGATCTGCAGCACGTACCGAAATAGAGCGTATTAAGCATGTATAATGAAACTCCCATAAAAAGACGTCC
TTCCACCCGCATCTATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADNFTNIASSTYVRGYVKNYARM
VSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRLTWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVA
AVNQTLPGDVLLTETDASQQLTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTADTSNEDGGSAIAATTGPQTAA
TVAQQSVAQQPVATAKPLPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKALVDGVKGAGAAVQVSGVPPFK
IILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA

Sequences:

>Translated_356_residues
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADNFTNIASSTYVRGYVKNYARM
VSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRLTWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVA
AVNQTLPGDVLLTETDASQQLTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTADTSNEDGGSAIAATTGPQTAA
TVAQQSVAQQPVATAKPLPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKALVDGVKGAGAAVQVSGVPPFK
IILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA
>Mature_356_residues
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADNFTNIASSTYVRGYVKNYARM
VSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRLTWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVA
AVNQTLPGDVLLTETDASQQLTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTADTSNEDGGSAIAATTGPQTAA
TVAQQSVAQQPVATAKPLPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKALVDGVKGAGAAVQVSGVPPFK
IILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 37319; Mature: 37319

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADN
CCCCCCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHCCCCC
FTNIASSTYVRGYVKNYARMVSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCH
TWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVAAVNQTLPGDVLLTETDASQQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHH
LTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTADTSNEDGGSAIAATTGPQTAA
HHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
TVAQQSVAQQPVATAKPLPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKAL
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEECCCEEEEEEEECCEEEEEEECCCCEE
VDGVKGAGAAVQVSGVPPFKIILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA
ECCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEECCCC
>Mature Secondary Structure
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADN
CCCCCCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHCCCCC
FTNIASSTYVRGYVKNYARMVSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCH
TWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVAAVNQTLPGDVLLTETDASQQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHH
LTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTADTSNEDGGSAIAATTGPQTAA
HHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
TVAQQSVAQQPVATAKPLPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKAL
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEECCCEEEEEEEECCEEEEEEECCCCEE
VDGVKGAGAAVQVSGVPPFKIILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA
ECCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA