| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is guaB [H]
Identifier: 126175186
GI number: 126175186
Start: 3509377
End: 3510843
Strand: Reverse
Name: guaB [H]
Synonym: Sbal_2984
Alternate gene names: 126175186
Gene position: 3510843-3509377 (Counterclockwise)
Preceding gene: 126175188
Following gene: 126175185
Centisome position: 68.47
GC content: 47.92
Gene sequence:
>1467_bases ATGCTACGTTTAATTAAAGAAGCGCTTACTTTTGACGATGTGTTGCTTGTTCCTGCGCATTCGACTGTACTCCCAAATAC CGCCATTCTTAAAACTCGCCTGACCAATACCATAGAATTGAATATCCCACTTGTGTCTGCCGCTATGGACACAGTTACCG AAGCTCGTCTTGCGATCGCTATGGCGCAGGAAGGCGGCTTAGGCTTTATTCATAAAAACATGAGCATTGAAAAACAAGCC GAAGAAGTTCGTAAAGTAAAAATTTACGAAGCGGGCGTGGTTCAACAACCTGTGACTGTGACGCCATCAACGACTTTAGC CGATCTGAAAGTGTTAACACTGAAGAATGGTTTTGCGGGTTATCCAGTGGTTAACGAAGCAAACGAGCTGGTCGGTATCA TTACTGGCCGTGACGTACGTTTCGTGACGGATTGGAGCAAAACGGTAGAGGAAGTGATGACGCCTAAAGCGCGTTTAGTC ACTGTTGCCGAAGGCACTAAATTAGATGAAGTGCAAAAATTGATGCACTCACACCGTATCGAAAAAGTCCTTGTGGTCGA TGATAACTATAAGCTGAAAGGCCTCATCACAGTTAAAGACTTCGAAAAAGCCGAACGTAAACCTAACGCCTGTAAAGATG AGTTAGGCCGTTTACGTGTTGGCGCTGCAGTTGGTGCGGGCGCAGGTAACGAGGAGCGTGTTGACGCACTCGTTAAAGCT GGTGTTGACGTATTACTTATCGATTCTTCCCACGGACATTCAGAAGGCGTTTTACAACGCATTCGTGAAACTCGCGCTAA ACATCCTGATTTGCAAATTATCGGTGGTAACGTTGCCACGGCTGAAGGCGCATTAGCGCTGGTCGAAGCGGGCGTTAACG CAGTTAAAGTGGGCATTGGCCCTGGTTCTATCTGTACGACTCGTATCGTAACTGGTGTTGGCGTGCCACAAATCACAGCC GTTTCAGATGCTGCCGCAGCCATGAAGAGCCTAGGTATTCCTGTTATTGCCGATGGTGGTATTCGTTTCTCTGGTGACTT AGCCAAAGCATTAGCCGCGGGTGCATCTTGCATCATGGCGGGCTCAATGTTTGCGGGAACTGAGGAAGCGCCAGGCGAAA CTGAACTTTATCAAGGCCGTGCGTATAAATCCTACCGTGGTATGGGGTCATTAGGCGCTATGTCTCAAGGCTCTTCTGAC CGTTATTTCCAATCAGACAATGCTGCCGACAAGTTAGTCCCAGAAGGTGTTGAAGCGCGCGTGCCTTACAAAGGCAAGTT GAAGGAAATCATCCATCAACATATGGGCGGTCTGCGTTCATGCATGGGCTTAACGGGTTGTGCCACCATTCTAGAACTGA ATGAAAAAGCCCAATTTGTGAAAGTGACTTCAGCAGGCATGGGCGAGTCTCACGTGCACGATGTGACTATCACTAAAGAA GCGCCGAACTATCGTTCAGGTTCTTAA
Upstream 100 bases:
>100_bases GGATATTTGCTATTTTCCATTTACCAGTGCCGATATGCAAGGTATAATCCCGCCGCAATATTTCACCTCTAAATCCTACT CAACTGGGGAGATGTTGCAT
Downstream 100 bases:
>100_bases TCGTTTGATAAGAGGGGGCGGCAATAAGCCGCCCCTTTGTAAAGCGTGTGATCCAATACTCAAGGCTGGCCCTCGCCGCG TTGAGCAATGTTAAAACAAT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTNTIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQA EEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKARLV TVAEGTKLDEVQKLMHSHRIEKVLVVDDNYKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRETRAKHPDLQIIGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAMKSLGIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTEEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGVEARVPYKGKLKEIIHQHMGGLRSCMGLTGCATILELNEKAQFVKVTSAGMGESHVHDVTITKE APNYRSGS
Sequences:
>Translated_488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTNTIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQA EEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKARLV TVAEGTKLDEVQKLMHSHRIEKVLVVDDNYKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRETRAKHPDLQIIGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAMKSLGIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTEEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGVEARVPYKGKLKEIIHQHMGGLRSCMGLTGCATILELNEKAQFVKVTSAGMGESHVHDVTITKE APNYRSGS >Mature_488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTNTIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQA EEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKARLV TVAEGTKLDEVQKLMHSHRIEKVLVVDDNYKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRETRAKHPDLQIIGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAMKSLGIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTEEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGVEARVPYKGKLKEIIHQHMGGLRSCMGLTGCATILELNEKAQFVKVTSAGMGESHVHDVTITKE APNYRSGS
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=452, Percent_Identity=41.1504424778761, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI156616279, Length=452, Percent_Identity=41.1504424778761, Blast_Score=326, Evalue=4e-89, Organism=Homo sapiens, GI34328930, Length=452, Percent_Identity=41.1504424778761, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI34328928, Length=452, Percent_Identity=41.1504424778761, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=39.8340248962656, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI217035152, Length=446, Percent_Identity=41.2556053811659, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI217035148, Length=452, Percent_Identity=40.0442477876106, Blast_Score=311, Evalue=9e-85, Organism=Homo sapiens, GI217035150, Length=452, Percent_Identity=37.6106194690265, Blast_Score=284, Evalue=1e-76, Organism=Homo sapiens, GI156104880, Length=246, Percent_Identity=37.8048780487805, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI50541954, Length=276, Percent_Identity=35.1449275362319, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI50541952, Length=276, Percent_Identity=35.1449275362319, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI50541948, Length=276, Percent_Identity=35.1449275362319, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI50541956, Length=276, Percent_Identity=35.1449275362319, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1788855, Length=488, Percent_Identity=79.7131147540984, Blast_Score=735, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=36.1990950226244, Blast_Score=141, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71994385, Length=475, Percent_Identity=37.4736842105263, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=39.3364928909953, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17560440, Length=238, Percent_Identity=35.7142857142857, Blast_Score=151, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=40.2892561983471, Blast_Score=334, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6322012, Length=486, Percent_Identity=39.0946502057613, Blast_Score=327, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=40.1656314699793, Blast_Score=320, Evalue=3e-88, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=40.6432748538012, Blast_Score=253, Evalue=7e-68, Organism=Saccharomyces cerevisiae, GI6319353, Length=122, Percent_Identity=39.344262295082, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=39.1304347826087, Blast_Score=311, Evalue=5e-85, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=39.1304347826087, Blast_Score=311, Evalue=5e-85, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=39.6825396825397, Blast_Score=284, Evalue=1e-76,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51760; Mature: 51760
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTNTIELNIPLVSAAMDTVTEARLAIA CHHHHHHHCCCCCEEEEECCCCCCCCHHEEHEECCCEEEEECCHHHHHHHHHHHHHHEEE MAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAG EECCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCCEEECCCCCHHCEEEEEEECCCCC YPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKARLVTVAEGTKLDEVQKLMHSHRI CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCC EKVLVVDDNYKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA CEEEEECCCEEEEEEEEECCHHHHHCCCCHHHHHHCCEEECEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKHPDLQIIGGNVATAEGALALVEAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAMKSLGIPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTEEAPGETELYQGRAYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGVEAR CCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VPYKGKLKEIIHQHMGGLRSCMGLTGCATILELNEKAQFVKVTSAGMGESHVHDVTITKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEC APNYRSGS CCCCCCCC >Mature Secondary Structure MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTNTIELNIPLVSAAMDTVTEARLAIA CHHHHHHHCCCCCEEEEECCCCCCCCHHEEHEECCCEEEEECCHHHHHHHHHHHHHHEEE MAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAG EECCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCCEEECCCCCHHCEEEEEEECCCCC YPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKARLVTVAEGTKLDEVQKLMHSHRI CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCC EKVLVVDDNYKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA CEEEEECCCEEEEEEEEECCHHHHHCCCCHHHHHHCCEEECEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKHPDLQIIGGNVATAEGALALVEAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAMKSLGIPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTEEAPGETELYQGRAYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGVEAR CCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VPYKGKLKEIIHQHMGGLRSCMGLTGCATILELNEKAQFVKVTSAGMGESHVHDVTITKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEC APNYRSGS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]