Definition | Shewanella baltica OS155 chromosome, complete genome. |
---|---|
Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is cheY [H]
Identifier: 126174330
GI number: 126174330
Start: 2451131
End: 2451496
Strand: Direct
Name: cheY [H]
Synonym: Sbal_2111
Alternate gene names: 126174330
Gene position: 2451131-2451496 (Clockwise)
Preceding gene: 126174329
Following gene: 126174331
Centisome position: 47.8
GC content: 46.45
Gene sequence:
>366_bases ATGAGTAAAAAAATATTAGTGGTTGATGATTCCGCTGCGATTCGACAAATGGTCGAAGCGACCCTTAAATCGGCTAACTA CCAAGTGGTACTGGCCAAAGATGGCCGTGAAGCCCTTGATCTTTGTAATGGGCAAAGATTTGATTTTATCCTGACGGATC AGAATATGCCGCGAATGGATGGACTGACCTTAATTAAATCCTTACGTGCTATGTCGGCATTTATGCGCACTCCGATCATT ATGCTCACGACGGAAGCGGGCGATGACATGAAGGCGCAAGGAAAAGCGGCAGGTGCGACGGGATGGATGGTAAAACCCTT TGATCCTCAAAAGCTGTTAGCGATTACGGCTAAAGTGCTGGGTTAA
Upstream 100 bases:
>100_bases TCAGCTTTCTGGACGAGGGCTCTCACTGGTGAAAACATTATCTAAGACCTACGAATTAGTATCACCAGGAAATATAACGA AAGTCATAATGGAATAGCGC
Downstream 100 bases:
>100_bases CTGCAACGGGGTGCGCTATGTCCATCAATATGGCCGAGTTCCATCAGGTCTTTTTTGAAGAAAGTCATGAACATCTTGAA AATATGGAACAATTGCTATT
Product: Fis family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSKKILVVDDSAAIRQMVEATLKSANYQVVLAKDGREALDLCNGQRFDFILTDQNMPRMDGLTLIKSLRAMSAFMRTPII MLTTEAGDDMKAQGKAAGATGWMVKPFDPQKLLAITAKVLG
Sequences:
>Translated_121_residues MSKKILVVDDSAAIRQMVEATLKSANYQVVLAKDGREALDLCNGQRFDFILTDQNMPRMDGLTLIKSLRAMSAFMRTPII MLTTEAGDDMKAQGKAAGATGWMVKPFDPQKLLAITAKVLG >Mature_120_residues SKKILVVDDSAAIRQMVEATLKSANYQVVLAKDGREALDLCNGQRFDFILTDQNMPRMDGLTLIKSLRAMSAFMRTPIIM LTTEAGDDMKAQGKAAGATGWMVKPFDPQKLLAITAKVLG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=105, Percent_Identity=40.9523809523809, Blast_Score=82, Evalue=1e-17, Organism=Escherichia coli, GI1786599, Length=114, Percent_Identity=35.9649122807018, Blast_Score=77, Evalue=4e-16, Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=32.4786324786325, Blast_Score=69, Evalue=9e-14, Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=32.4786324786325, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=34.1880341880342, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI87082012, Length=111, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1787375, Length=111, Percent_Identity=31.5315315315315, Blast_Score=62, Evalue=8e-12, Organism=Escherichia coli, GI1790299, Length=116, Percent_Identity=29.3103448275862, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1788394, Length=119, Percent_Identity=29.4117647058824, Blast_Score=61, Evalue=3e-11, Organism=Escherichia coli, GI145693157, Length=102, Percent_Identity=34.3137254901961, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13221; Mature: 13090
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKILVVDDSAAIRQMVEATLKSANYQVVLAKDGREALDLCNGQRFDFILTDQNMPRMD CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCH GLTLIKSLRAMSAFMRTPIIMLTTEAGDDMKAQGKAAGATGWMVKPFDPQKLLAITAKVL HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHC G C >Mature Secondary Structure SKKILVVDDSAAIRQMVEATLKSANYQVVLAKDGREALDLCNGQRFDFILTDQNMPRMD CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCH GLTLIKSLRAMSAFMRTPIIMLTTEAGDDMKAQGKAAGATGWMVKPFDPQKLLAITAKVL HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9720026 [H]