Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126174329
Identifier: 126174329
GI number: 126174329
Start: 2450018
End: 2451127
Strand: Direct
Name: 126174329
Synonym: Sbal_2110
Alternate gene names: NA
Gene position: 2450018-2451127 (Clockwise)
Preceding gene: 126174327
Following gene: 126174330
Centisome position: 47.78
GC content: 37.39
Gene sequence:
>1110_bases GTGCTTGCAGATTCAACGGGCCACGGATTAAGTGCAGCAATGCCAATTATGCGTGTTGCAAGTACATTTAGAGCCATGGT TTCAAAGGGGTTTTCATTAGCAACGCTAATATATGAACTAAACTCAAAAGTACATAGAGAAAATCCTGATGATCGCTTTG TTGCTTGTATTGTTTTAGAAGTCGATTTTTATCGAAAAAAAATACATATTTGGAACGGGGGGATGCCACCCGTATATATC AAAAATCATCTTGAAACTGAAACAGTCTCAGACCATTATCCTGTAAAAAATATCATAAAATTCAAATCAACAAACATGGC TCTTGGCATTTTGCCCTCCCAAACCTTCGTGGCGGATATTGCTACGGTTGATTTACCCGTTGTCGGCCATGCTTGTTTAT TTAGTGATGGATTAATTGAACAATACACTAATGAAAACAAACCCTTTGGCATTGAAACTTTAAATTCATTATTTATCCAA TACGCGAGTGAGCTTATCCCATACTTAACAGAAAACTTTAAAAAAGTTTTCGATGGCAAGCCTATTACAGATGATATTAC AGTATGCACATTAGACTTTGAGCGATTGAATGAATGGCATCAACAGAATAATATCTGCCTTGCCCGGTCAAATATGGATG GCGAATTTGATTGGGAGGTCAAACTCGCTGGGCCTATGTTGTTAAGTGCTGAATATTTGAATTCTTTGAATCAATTCTTA GGTATGTTTGGATTTGCGACAAGTTTTTGCCAAAGGGTTTTTACTGTGGTTGCCGAACTATTTAGTAATGCTATAGACCA TGGTGTACTAAAATTAGATTCTCGGCTAAAAAGTGATCCGGATGGTTTCGAACTGTACCATAGTATTAGAGACAGTTCTT CAGCACGACTCACAATGAATGATTGGGTAAAAGTGAGTTTAGTTTGGTGTTCCATAACGAATGAGTTGCATATATGTGTG GCAGATAGTGGTCAAGGATTTAAGGGATATAAAAATACTGTTGTAGATATCCCTCAGCTTTCTGGACGAGGGCTCTCACT GGTGAAAACATTATCTAAGACCTACGAATTAGTATCACCAGGAAATATAACGAAAGTCATAATGGAATAG
Upstream 100 bases:
>100_bases GTGATACTCTTTTACTTTGGCGAGATAAAGCGTACCACTTTTCAGCAGTTGGCTTCTTCTACACCTCGATTAGAGTGTCG CAGTTATTATCTGAATTCTG
Downstream 100 bases:
>100_bases CGCATGAGTAAAAAAATATTAGTGGTTGATGATTCCGCTGCGATTCGACAAATGGTCGAAGCGACCCTTAAATCGGCTAA CTACCAAGTGGTACTGGCCA
Product: stage II sporulation E family protein
Products: NA
Alternate protein names: Response Regulator; Two-Component Response Regulator; Response Regulator Receiver Domain-Containing Protein; Flagellar Basal-Body Rod Protein FlgC; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Response Regulator Receiver Domain Protein; Histidine Kinase; Stage II Sporulation E Family Protein; Response Regulator Receiver; Response Regulator Of Sigma Subunit Serine Phosphatase; PAS/PAC Sensor Protein; Stage II Sporulation E; Sensor Histidine Kinase/Response Regulator
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MLADSTGHGLSAAMPIMRVASTFRAMVSKGFSLATLIYELNSKVHRENPDDRFVACIVLEVDFYRKKIHIWNGGMPPVYI KNHLETETVSDHYPVKNIIKFKSTNMALGILPSQTFVADIATVDLPVVGHACLFSDGLIEQYTNENKPFGIETLNSLFIQ YASELIPYLTENFKKVFDGKPITDDITVCTLDFERLNEWHQQNNICLARSNMDGEFDWEVKLAGPMLLSAEYLNSLNQFL GMFGFATSFCQRVFTVVAELFSNAIDHGVLKLDSRLKSDPDGFELYHSIRDSSSARLTMNDWVKVSLVWCSITNELHICV ADSGQGFKGYKNTVVDIPQLSGRGLSLVKTLSKTYELVSPGNITKVIME
Sequences:
>Translated_369_residues MLADSTGHGLSAAMPIMRVASTFRAMVSKGFSLATLIYELNSKVHRENPDDRFVACIVLEVDFYRKKIHIWNGGMPPVYI KNHLETETVSDHYPVKNIIKFKSTNMALGILPSQTFVADIATVDLPVVGHACLFSDGLIEQYTNENKPFGIETLNSLFIQ YASELIPYLTENFKKVFDGKPITDDITVCTLDFERLNEWHQQNNICLARSNMDGEFDWEVKLAGPMLLSAEYLNSLNQFL GMFGFATSFCQRVFTVVAELFSNAIDHGVLKLDSRLKSDPDGFELYHSIRDSSSARLTMNDWVKVSLVWCSITNELHICV ADSGQGFKGYKNTVVDIPQLSGRGLSLVKTLSKTYELVSPGNITKVIME >Mature_369_residues MLADSTGHGLSAAMPIMRVASTFRAMVSKGFSLATLIYELNSKVHRENPDDRFVACIVLEVDFYRKKIHIWNGGMPPVYI KNHLETETVSDHYPVKNIIKFKSTNMALGILPSQTFVADIATVDLPVVGHACLFSDGLIEQYTNENKPFGIETLNSLFIQ YASELIPYLTENFKKVFDGKPITDDITVCTLDFERLNEWHQQNNICLARSNMDGEFDWEVKLAGPMLLSAEYLNSLNQFL GMFGFATSFCQRVFTVVAELFSNAIDHGVLKLDSRLKSDPDGFELYHSIRDSSSARLTMNDWVKVSLVWCSITNELHICV ADSGQGFKGYKNTVVDIPQLSGRGLSLVKTLSKTYELVSPGNITKVIME
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41365; Mature: 41365
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLADSTGHGLSAAMPIMRVASTFRAMVSKGFSLATLIYELNSKVHRENPDDRFVACIVLE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEE VDFYRKKIHIWNGGMPPVYIKNHLETETVSDHYPVKNIIKFKSTNMALGILPSQTFVADI EEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHEECCCCEEEEECCCHHHHHHH ATVDLPVVGHACLFSDGLIEQYTNENKPFGIETLNSLFIQYASELIPYLTENFKKVFDGK HHCCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PITDDITVCTLDFERLNEWHQQNNICLARSNMDGEFDWEVKLAGPMLLSAEYLNSLNQFL CCCCCEEEEEEEHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCEEHHHHHHHHHHHH GMFGFATSFCQRVFTVVAELFSNAIDHGVLKLDSRLKSDPDGFELYHSIRDSSSARLTMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEC DWVKVSLVWCSITNELHICVADSGQGFKGYKNTVVDIPQLSGRGLSLVKTLSKTYELVSP CCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC GNITKVIME CCEEEEEEC >Mature Secondary Structure MLADSTGHGLSAAMPIMRVASTFRAMVSKGFSLATLIYELNSKVHRENPDDRFVACIVLE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEE VDFYRKKIHIWNGGMPPVYIKNHLETETVSDHYPVKNIIKFKSTNMALGILPSQTFVADI EEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHEECCCCEEEEECCCHHHHHHH ATVDLPVVGHACLFSDGLIEQYTNENKPFGIETLNSLFIQYASELIPYLTENFKKVFDGK HHCCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PITDDITVCTLDFERLNEWHQQNNICLARSNMDGEFDWEVKLAGPMLLSAEYLNSLNQFL CCCCCEEEEEEEHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCEEHHHHHHHHHHHH GMFGFATSFCQRVFTVVAELFSNAIDHGVLKLDSRLKSDPDGFELYHSIRDSSSARLTMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEC DWVKVSLVWCSITNELHICVADSGQGFKGYKNTVVDIPQLSGRGLSLVKTLSKTYELVSP CCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC GNITKVIME CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA