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The map label for this gene is atoC [C]

Identifier: 126174327

GI number: 126174327

Start: 2448341

End: 2449015

Strand: Direct

Name: atoC [C]

Synonym: Sbal_2108

Alternate gene names: 126174327

Gene position: 2448341-2449015 (Clockwise)

Preceding gene: 126174326

Following gene: 126174329

Centisome position: 47.75

GC content: 36.0

Gene sequence:

>675_bases
ATGAAATCATTAATAGCAAAGAAGAACTATATATTAGTCATCGATGACGATGTTATGATGAGCCAGACAATTAGTGACTT
TATTCATGGGAAAGGTTACCACGTCATTGTATGTAATAATCTTGAGGAAGCTTTCTCAGAGTTGTCACAATATAAGATTG
ATCTTATATTGATTAATTTTTGGCAGCCAGATGGTACAGCTCTAATTTTACTTGAACATTTAAATGAAGAAAAAATAACG
ACTCCAGTCATAGTGATCAGCAATACTAAGGAACATCAGTCCGTATTAGAATGTTTTCGGATGGGCGTATTAGATTTTGT
TGTTAAGCCAATTAACCTTGAGATATTTTGGTATAAAGTCGAGTGCTTATTAACTCGGGTTAAGTTACAGCATGAAGTTA
AGCTACAAAGAGTTGAACTTGAAAAAATGCTGTATGAGAAAGCCAGAGAAGAAAAAATGGCTAGGAACTTATTCGAGCAC
TTAGTCAATATTGATAATACCCAATTCGAGTTTGTTCGTACTTTCTGCCAGGCAAGTGCCAATTTTAGTGGTGACATAAT
CCTTAAAGGGTTAGCTCCTAATGGCAATTTTTTCCTTATGCCCGAATTCAACTCCGAAGTGCGACACTCGACAATTAAGC
AGCTAATTGGTGAAATACCACCGCAGGCTGCTTAA

Upstream 100 bases:

>100_bases
TACATATTTCGACCTCTATTAAAGGTGCGCATGGTCAAGCTGAGGAAATACTCAACATTGCTAACATGCAGAAACTCTAC
ATTATAGAGAATTGCTAGTC

Downstream 100 bases:

>100_bases
ACTTCAAACACTTTTTGGGTCGATAGTTAATTCTATTCTGAGCAAATTCGATTAATTCATCACTCACTAGCCTCAAATCA
ACCCCTTTTTTGACGTACTG

Product: response regulator receiver protein

Products: NA

Alternate protein names: Two-Component Response Regulator; Response Regulator Receiver Protein; Response Regulator; Response Regulator Receiver Modulated Diguanylate Cyclase; Response Regulator Protein; Response Regulator Receiver Domain Protein; Nitrogen Regulation Protein NtrX; Two Component Transcriptional Regulator Fis Family; Sensor Kinase Of HydH/G Two-Component System; Response Regulator Receiver; Sigma-54 Factor Interaction Domain-Containing Protein; Two Component Fis Family Transcriptional Regulator; Two-Component Regulator; Ntr Family Protein Two-Component System Response Regulator; Fusion Protein Sensory Box Response Regulator; Signal Transduction Histidine Kinase

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKSLIAKKNYILVIDDDVMMSQTISDFIHGKGYHVIVCNNLEEAFSELSQYKIDLILINFWQPDGTALILLEHLNEEKIT
TPVIVISNTKEHQSVLECFRMGVLDFVVKPINLEIFWYKVECLLTRVKLQHEVKLQRVELEKMLYEKAREEKMARNLFEH
LVNIDNTQFEFVRTFCQASANFSGDIILKGLAPNGNFFLMPEFNSEVRHSTIKQLIGEIPPQAA

Sequences:

>Translated_224_residues
MKSLIAKKNYILVIDDDVMMSQTISDFIHGKGYHVIVCNNLEEAFSELSQYKIDLILINFWQPDGTALILLEHLNEEKIT
TPVIVISNTKEHQSVLECFRMGVLDFVVKPINLEIFWYKVECLLTRVKLQHEVKLQRVELEKMLYEKAREEKMARNLFEH
LVNIDNTQFEFVRTFCQASANFSGDIILKGLAPNGNFFLMPEFNSEVRHSTIKQLIGEIPPQAA
>Mature_224_residues
MKSLIAKKNYILVIDDDVMMSQTISDFIHGKGYHVIVCNNLEEAFSELSQYKIDLILINFWQPDGTALILLEHLNEEKIT
TPVIVISNTKEHQSVLECFRMGVLDFVVKPINLEIFWYKVECLLTRVKLQHEVKLQRVELEKMLYEKAREEKMARNLFEH
LVNIDNTQFEFVRTFCQASANFSGDIILKGLAPNGNFFLMPEFNSEVRHSTIKQLIGEIPPQAA

Specific function: Member Of The Two-Component Regulatory System Atos/Atoc Involved In The Transcriptional Regulation Of The Ato Genes For Acetoacetate Metabolism. Also An Inhibitor Of Polyamine Biosynthesis. [C]

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25934; Mature: 25934

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLIAKKNYILVIDDDVMMSQTISDFIHGKGYHVIVCNNLEEAFSELSQYKIDLILINF
CCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCEEEEEEEEE
WQPDGTALILLEHLNEEKITTPVIVISNTKEHQSVLECFRMGVLDFVVKPINLEIFWYKV
ECCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEH
ECLLTRVKLQHEVKLQRVELEKMLYEKAREEKMARNLFEHLVNIDNTQFEFVRTFCQASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
NFSGDIILKGLAPNGNFFLMPEFNSEVRHSTIKQLIGEIPPQAA
CCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSLIAKKNYILVIDDDVMMSQTISDFIHGKGYHVIVCNNLEEAFSELSQYKIDLILINF
CCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCEEEEEEEEE
WQPDGTALILLEHLNEEKITTPVIVISNTKEHQSVLECFRMGVLDFVVKPINLEIFWYKV
ECCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEH
ECLLTRVKLQHEVKLQRVELEKMLYEKAREEKMARNLFEHLVNIDNTQFEFVRTFCQASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
NFSGDIILKGLAPNGNFFLMPEFNSEVRHSTIKQLIGEIPPQAA
CCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA