| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is thiE [H]
Identifier: 126174245
GI number: 126174245
Start: 2342995
End: 2344947
Strand: Direct
Name: thiE [H]
Synonym: Sbal_2023
Alternate gene names: 126174245
Gene position: 2342995-2344947 (Clockwise)
Preceding gene: 126174244
Following gene: 126174246
Centisome position: 45.7
GC content: 48.44
Gene sequence:
>1953_bases ATGTTGGGTATTCATGGGGATAATGCGCCCATGAATACCGAGCATCCCGCGTTTGTTTGGACCATAGCTGGTTCAGATAG TGGCGGTGGTGCCGGTATTCAGGCGGACTTAGCGACAATTCAAGATTTGGGCTGTCACGGTTGCAGTGTGGTCACCACAG TGACGGCGCAAAGTTCTGTGGCGGTCACTTTAGTCGAGCCCGTATCAGCGGCGATGTTAATGGCTCAGCTGACGACTTTA CTTTCCGACTTACCACCCAAAGCAATTAAAATCGGCTTACTGGCAGATCAAACTCAAGTGGCATTGCTGGCAGATTGGAT CGCGAGTTTTAAAATCCACTATCCATCTGTGCCTGTGATTGTCGATCCTGTGATGGTCGCCAGTTGTGGCGATGCATTAG CAGTAGATAACTGTCAGGATATAAAAAGTGCGGCTAAATCAGCCTTAGATTTTAAGCCTTTCAAAGGTTTAATCGAACTT ATCACGCCCAATGTGCTTGAACTTGGGCGGTTAACTCACAGTGATGTTTCAACGAAAGCGCAATTCGCTGCCGCGGCACT GGCCTTATCCCAGAGCCTTGATTGCAGTGTGCTCGCCAAAGGGGGCGATGTGAGCTTTGGCAGCACTGACATTCTTGATG ATACTCATGCTCAAACTCACGATAACACTTATGCTCAAACTCAGGCTAACGTTCATGTTATCGCTCTTGATAGCAACGGC TGGGACCTTGAGCTTGCCGAGGATTATCTAGTTTGTCGTCAAGTGCGCGCGAGCTCTAAACTACATCAAAATGGGCGTTT CTGGTTAGCAAGCCAGCGGGTTAATACCCCTCATAACCATGGTAGCGGCTGTACTTTGTCATCGGCCATTGCCGCCGTGT TAGCGCAGGGGTTTGTATTACAAGATGCGGTGGTGGTTGCCAAAGCCTACGTGAGTCAAGGCTTAAGCGCGGCGATTGGT TTAGGGCAAGGTCCAGGGCCGTTGGCCCGTACGGGTTGGCCTAATGATGTGTCCCGCTATGCCAAGATAAATCTGTGTGA TAGCAATTTTATTAGTCATCAACTCAACCAACACCTTGATGTTGGTAATGATTTAGTTGCAACAGTTTTATCCGCAACAG ATCAGGCAACCGCTCAGGTAAGAATAGCCTCGACGCAACCTCAAAATATTTTATCCCACGGTTTTAAAGTGCTCGATGCC GATCTTGGTGTTTACCCCGTAGTGAATGACTTAACCATGCTGGAGAGTTTGTTAGCTGCGGGCGTTAAAACCCTGCAGTT ACGGATAAAAACCGACATCAGCGAGTTAACTACTGCAGGGTTAGCCGAATCTGATTTAGGTAAATCTGCGCTAAGTAGAT GTGAGTCAGGCAAATCTAAGTCAGGCGAACCTGAGTTAATTGGCTCCGAATTAGAAGCACAAATTCAAACGGCCATTGCC TTAGGTAAGCATTTTAATGCGCAGCTTTTTATCAATGATCACTGGCAGTTAGCGATAAAATACCATGCCTTTGGGGTACA TTTAGGCCAAGAAGATCTCGCCGTTACCGACTTAGCGGCCATTCAAGCCGCGGGGCTCGCGCTAGGCATATCGAGCCACA GTTATTTCGAGCTGTTATTGGCGCACCAATACTCGCCATCCTACATAGCGCTTGGGCATATATTCCCAACCACGACGAAG CAAATGCCTTCGGCGCCCCAAGGGCTCGCAAAACTTAAACACTATGTGGCGTTACTCCAAGACCATTATCCCTTGGTCGC CATTGGCGGTATTGACTTAACAAATCTGGCAAAGGTGAAAGCAACGGGGGTGGGCAATATTGCTGTGGTGCGCGCAATAA CGAAAGCTAAGGATCCGTTAGCCGCCTTTGCAGAGTTGAGCCAAGCTTGGGAGCAATGTAGCTTGTCTGAAGAACTGGCT GTAAAGCATGAGTTGGATGCAAAGCATGAGTAA
Upstream 100 bases:
>100_bases AAGCGGCAATGGCGCTAAAATCGGCACAATTTGCTGCTTCGGGCGCCGAGATCTATCACGTGAAAGACAAGCTTGTCGCC GAAGCTGAGGAAGCCTAATT
Downstream 100 bases:
>100_bases AAACCCACCGCTTGCTCACGCAGAGGTTCTTTGCGGTCATATACACAGCGACAATGAACACTGCGGCCATACACTCAGTG ATGCCGATTTCATCCGTTAT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MLGIHGDNAPMNTEHPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSAAMLMAQLTTL LSDLPPKAIKIGLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCGDALAVDNCQDIKSAAKSALDFKPFKGLIEL ITPNVLELGRLTHSDVSTKAQFAAAALALSQSLDCSVLAKGGDVSFGSTDILDDTHAQTHDNTYAQTQANVHVIALDSNG WDLELAEDYLVCRQVRASSKLHQNGRFWLASQRVNTPHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQGLSAAIG LGQGPGPLARTGWPNDVSRYAKINLCDSNFISHQLNQHLDVGNDLVATVLSATDQATAQVRIASTQPQNILSHGFKVLDA DLGVYPVVNDLTMLESLLAAGVKTLQLRIKTDISELTTAGLAESDLGKSALSRCESGKSKSGEPELIGSELEAQIQTAIA LGKHFNAQLFINDHWQLAIKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTTTK QMPSAPQGLAKLKHYVALLQDHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKDPLAAFAELSQAWEQCSLSEELA VKHELDAKHE
Sequences:
>Translated_650_residues MLGIHGDNAPMNTEHPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSAAMLMAQLTTL LSDLPPKAIKIGLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCGDALAVDNCQDIKSAAKSALDFKPFKGLIEL ITPNVLELGRLTHSDVSTKAQFAAAALALSQSLDCSVLAKGGDVSFGSTDILDDTHAQTHDNTYAQTQANVHVIALDSNG WDLELAEDYLVCRQVRASSKLHQNGRFWLASQRVNTPHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQGLSAAIG LGQGPGPLARTGWPNDVSRYAKINLCDSNFISHQLNQHLDVGNDLVATVLSATDQATAQVRIASTQPQNILSHGFKVLDA DLGVYPVVNDLTMLESLLAAGVKTLQLRIKTDISELTTAGLAESDLGKSALSRCESGKSKSGEPELIGSELEAQIQTAIA LGKHFNAQLFINDHWQLAIKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTTTK QMPSAPQGLAKLKHYVALLQDHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKDPLAAFAELSQAWEQCSLSEELA VKHELDAKHE >Mature_650_residues MLGIHGDNAPMNTEHPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSAAMLMAQLTTL LSDLPPKAIKIGLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCGDALAVDNCQDIKSAAKSALDFKPFKGLIEL ITPNVLELGRLTHSDVSTKAQFAAAALALSQSLDCSVLAKGGDVSFGSTDILDDTHAQTHDNTYAQTQANVHVIALDSNG WDLELAEDYLVCRQVRASSKLHQNGRFWLASQRVNTPHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQGLSAAIG LGQGPGPLARTGWPNDVSRYAKINLCDSNFISHQLNQHLDVGNDLVATVLSATDQATAQVRIASTQPQNILSHGFKVLDA DLGVYPVVNDLTMLESLLAAGVKTLQLRIKTDISELTTAGLAESDLGKSALSRCESGKSKSGEPELIGSELEAQIQTAIA LGKHFNAQLFINDHWQLAIKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTTTK QMPSAPQGLAKLKHYVALLQDHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKDPLAAFAELSQAWEQCSLSEELA VKHELDAKHE
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=224, Percent_Identity=52.2321428571429, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1788420, Length=314, Percent_Identity=29.9363057324841, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6325378, Length=305, Percent_Identity=28.1967213114754, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324997, Length=195, Percent_Identity=29.2307692307692, Blast_Score=71, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6324517, Length=203, Percent_Identity=29.5566502463054, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 68611; Mature: 68611
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIHGDNAPMNTEHPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSV CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCE AVTLVEPVSAAMLMAQLTTLLSDLPPKAIKIGLLADQTQVALLADWIASFKIHYPSVPVI EEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCEEECCCCCEE VDPVMVASCGDALAVDNCQDIKSAAKSALDFKPFKGLIELITPNVLELGRLTHSDVSTKA ECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHH QFAAAALALSQSLDCSVLAKGGDVSFGSTDILDDTHAQTHDNTYAQTQANVHVIALDSNG HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCC WDLELAEDYLVCRQVRASSKLHQNGRFWLASQRVNTPHNHGSGCTLSSAIAAVLAQGFVL CEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHH QDAVVVAKAYVSQGLSAAIGLGQGPGPLARTGWPNDVSRYAKINLCDSNFISHQLNQHLD HHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHCC VGNDLVATVLSATDQATAQVRIASTQPQNILSHGFKVLDADLGVYPVVNDLTMLESLLAA CCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHC GVKTLQLRIKTDISELTTAGLAESDLGKSALSRCESGKSKSGEPELIGSELEAQIQTAIA CCEEEEEEEECCHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH LGKHFNAQLFINDHWQLAIKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLL HCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCHHHHHHH AHQYSPSYIALGHIFPTTTKQMPSAPQGLAKLKHYVALLQDHYPLVAIGGIDLTNLAKVK HHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHEEE ATGVGNIAVVRAITKAKDPLAAFAELSQAWEQCSLSEELAVKHELDAKHE ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MLGIHGDNAPMNTEHPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSV CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCE AVTLVEPVSAAMLMAQLTTLLSDLPPKAIKIGLLADQTQVALLADWIASFKIHYPSVPVI EEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCEEECCCCCEE VDPVMVASCGDALAVDNCQDIKSAAKSALDFKPFKGLIELITPNVLELGRLTHSDVSTKA ECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHH QFAAAALALSQSLDCSVLAKGGDVSFGSTDILDDTHAQTHDNTYAQTQANVHVIALDSNG HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCC WDLELAEDYLVCRQVRASSKLHQNGRFWLASQRVNTPHNHGSGCTLSSAIAAVLAQGFVL CEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHH QDAVVVAKAYVSQGLSAAIGLGQGPGPLARTGWPNDVSRYAKINLCDSNFISHQLNQHLD HHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHCC VGNDLVATVLSATDQATAQVRIASTQPQNILSHGFKVLDADLGVYPVVNDLTMLESLLAA CCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHC GVKTLQLRIKTDISELTTAGLAESDLGKSALSRCESGKSKSGEPELIGSELEAQIQTAIA CCEEEEEEEECCHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH LGKHFNAQLFINDHWQLAIKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLL HCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCHHHHHHH AHQYSPSYIALGHIFPTTTKQMPSAPQGLAKLKHYVALLQDHYPLVAIGGIDLTNLAKVK HHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHEEE ATGVGNIAVVRAITKAKDPLAAFAELSQAWEQCSLSEELAVKHELDAKHE ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA