| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173516
Identifier: 126173516
GI number: 126173516
Start: 1464806
End: 1465054
Strand: Reverse
Name: 126173516
Synonym: Sbal_1278
Alternate gene names: NA
Gene position: 1465054-1464806 (Counterclockwise)
Preceding gene: 126173519
Following gene: 126173507
Centisome position: 28.57
GC content: 47.79
Gene sequence:
>249_bases ATGCGGATACTGTGCACTAGCTGTGGTAAAAAATCGGTGATCGGTAAAACGGATAGATTAAGTTTGTCGCACGCTAATCT TTACTGTTCCTGCAGTGATCCAGAGTGTGGCCACACGTTCGTCACCAATGTGTCGTTTAGCCACACGTTAAGCCCATCAG CAAAAAACACCTCAGAGATCGTCACTGCTTTAGCCAAAGCGCTGTCCCCCGAACAGCGCAAAGCCTTACAGCGCGAATTA GCGTTTTAA
Upstream 100 bases:
>100_bases CTGTTTTCTTAACAATTTCAAAATTCATAAACAACTCCACTGTTTAAAAATACAGTATCATGACTTACACTATCCCTAGT CAAACGATTGGGAGATCGAC
Downstream 100 bases:
>100_bases CTATCGCTATGCTGCTGAGCTGCCAGCACTAGCGCCATGATTGAAACAGCTAAATCCTTTTTCGCCTCGCTGCCTGAGCC GTTATACATATCAATCAACA
Product: phage transcriptional activator, Ogr/delta
Products: NA
Alternate protein names: Phage Transcriptional Activator Ogr/Delta; Zinc-Finger Protein; Phage Gene; Bacteriophage Transcription Regulator Protein; Phage Protein
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRILCTSCGKKSVIGKTDRLSLSHANLYCSCSDPECGHTFVTNVSFSHTLSPSAKNTSEIVTALAKALSPEQRKALQREL AF
Sequences:
>Translated_82_residues MRILCTSCGKKSVIGKTDRLSLSHANLYCSCSDPECGHTFVTNVSFSHTLSPSAKNTSEIVTALAKALSPEQRKALQREL AF >Mature_82_residues MRILCTSCGKKSVIGKTDRLSLSHANLYCSCSDPECGHTFVTNVSFSHTLSPSAKNTSEIVTALAKALSPEQRKALQREL AF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8887; Mature: 8887
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILCTSCGKKSVIGKTDRLSLSHANLYCSCSDPECGHTFVTNVSFSHTLSPSAKNTSEI CEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHH VTALAKALSPEQRKALQRELAF HHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MRILCTSCGKKSVIGKTDRLSLSHANLYCSCSDPECGHTFVTNVSFSHTLSPSAKNTSEI CEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHH VTALAKALSPEQRKALQRELAF HHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA