| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173507
Identifier: 126173507
GI number: 126173507
Start: 1458482
End: 1459183
Strand: Reverse
Name: 126173507
Synonym: Sbal_1269
Alternate gene names: NA
Gene position: 1459183-1458482 (Counterclockwise)
Preceding gene: 126173516
Following gene: 126173505
Centisome position: 28.46
GC content: 40.31
Gene sequence:
>702_bases ATGAAAAATTTTGTCAATATTCAAAATACACAATTTAGAATCCCTTTGAATTCATCGCCTGAATATGACGGCGGTGATGC CGTTATATTGCGACTTCTGGCAATGTTTGGTGTACGTAATCGACTCGAACTTGGTGAGGTACTAGGGGTCAGTTCAGGTA CTTTCGCGACATGGAAAACCCGTAACACGACGCCTTTTGAACTACTTATAAGAATTCATCTAGCCACAGGGGTTCCTATG GAATACCTATGTTTCGGGCACGAAGACGAAACAGTTGACTTAATGAAGTATGGCGTATCAAAGAAGACTGAATATGTAGA CGGAGAAGTGATTAGTGTTGAAGATCGGTTGGCGACTTACCGTCTACCATCCATAAAAATTTCTTCAATTGAAAATGGTC ATTTGAAACCTAATGCTGAAATTTGTACGGATAAGTCATTCATGCGGATGGCGGGTATTGAGGGGATAGATTCTGATTTG GTCATCAAAGAGTCAGGCCAGTTGCTTTTTATCAATTCAAATGAAACATCTGTTTCAAATGGCCGTTATTTGTTTGCGAT TAATGATACTTACCAAATTGGTGATTTACGTATGCTGCCAGATGGCCATGTCTATCTGTTCCATGCTGGTGATAAGTACC AAGTCGACCCAAACACCACCAAGATCCACGGAAAAGTGGTATCAGTTTTAGAAACGGTTTAA
Upstream 100 bases:
>100_bases GGTTCATAGCAAGTTATCCTAACGAAGTTATTAGACGCGAATTGATGTTGATTAGTTTTGACGGACTTCAACATCTCAAA CTCGAGATATAATTGACCAT
Downstream 100 bases:
>100_bases TCCCGAATTCAACTCCGAAGTGCGACACTCGACAATTAAGCAGCTAATTGGTGAAATACCACCGCAGGCTGCTTAAACTT CAAACACTTTTTGGGTCGAT
Product: bacteriophage CI repressor
Products: NA
Alternate protein names: Bacteriophage CI Repressor
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKNFVNIQNTQFRIPLNSSPEYDGGDAVILRLLAMFGVRNRLELGEVLGVSSGTFATWKTRNTTPFELLIRIHLATGVPM EYLCFGHEDETVDLMKYGVSKKTEYVDGEVISVEDRLATYRLPSIKISSIENGHLKPNAEICTDKSFMRMAGIEGIDSDL VIKESGQLLFINSNETSVSNGRYLFAINDTYQIGDLRMLPDGHVYLFHAGDKYQVDPNTTKIHGKVVSVLETV
Sequences:
>Translated_233_residues MKNFVNIQNTQFRIPLNSSPEYDGGDAVILRLLAMFGVRNRLELGEVLGVSSGTFATWKTRNTTPFELLIRIHLATGVPM EYLCFGHEDETVDLMKYGVSKKTEYVDGEVISVEDRLATYRLPSIKISSIENGHLKPNAEICTDKSFMRMAGIEGIDSDL VIKESGQLLFINSNETSVSNGRYLFAINDTYQIGDLRMLPDGHVYLFHAGDKYQVDPNTTKIHGKVVSVLETV >Mature_233_residues MKNFVNIQNTQFRIPLNSSPEYDGGDAVILRLLAMFGVRNRLELGEVLGVSSGTFATWKTRNTTPFELLIRIHLATGVPM EYLCFGHEDETVDLMKYGVSKKTEYVDGEVISVEDRLATYRLPSIKISSIENGHLKPNAEICTDKSFMRMAGIEGIDSDL VIKESGQLLFINSNETSVSNGRYLFAINDTYQIGDLRMLPDGHVYLFHAGDKYQVDPNTTKIHGKVVSVLETV
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26071; Mature: 26071
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFVNIQNTQFRIPLNSSPEYDGGDAVILRLLAMFGVRNRLELGEVLGVSSGTFATWKT CCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEC RNTTPFELLIRIHLATGVPMEYLCFGHEDETVDLMKYGVSKKTEYVDGEVISVEDRLATY CCCCHHEEEEEEEECCCCCHHHEEECCCCCCHHHHHHCCCCCCEECCCEEEEEECCEEEE RLPSIKISSIENGHLKPNAEICTDKSFMRMAGIEGIDSDLVIKESGQLLFINSNETSVSN ECCCEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCC GRYLFAINDTYQIGDLRMLPDGHVYLFHAGDKYQVDPNTTKIHGKVVSVLETV CEEEEEECCEEEECCEEECCCCCEEEEECCCEEEECCCCEEEHHHHHHHHHCC >Mature Secondary Structure MKNFVNIQNTQFRIPLNSSPEYDGGDAVILRLLAMFGVRNRLELGEVLGVSSGTFATWKT CCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEC RNTTPFELLIRIHLATGVPMEYLCFGHEDETVDLMKYGVSKKTEYVDGEVISVEDRLATY CCCCHHEEEEEEEECCCCCHHHEEECCCCCCHHHHHHCCCCCCEECCCEEEEEECCEEEE RLPSIKISSIENGHLKPNAEICTDKSFMRMAGIEGIDSDLVIKESGQLLFINSNETSVSN ECCCEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCC GRYLFAINDTYQIGDLRMLPDGHVYLFHAGDKYQVDPNTTKIHGKVVSVLETV CEEEEEECCEEEECCEEECCCCCEEEEECCCEEEECCCCEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA