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The map label for this gene is 126173519

Identifier: 126173519

GI number: 126173519

Start: 1466279

End: 1467319

Strand: Reverse

Name: 126173519

Synonym: Sbal_1281

Alternate gene names: NA

Gene position: 1467319-1466279 (Counterclockwise)

Preceding gene: 126173520

Following gene: 126173516

Centisome position: 28.62

GC content: 50.91

Gene sequence:

>1041_bases
ATGGGCGATGCAACACTAACGGCCGCGAACGACGATACACTGAATACTGACGCTAACGGCCCCGCTAAAACGGTGGTGTT
TAGCATGCCTGAGACCGTGATGCCGAATATGTGGCTTACGGATTACGACTCGCTGTATTTCAACCAAAACGACAACTATT
GGGAACCGCCTGTCGATCGGCAGCTGCTGGCGAACTTGACCCGCCGCAATGCGCAACACGGCGGCATAGTGCAAAGTCGG
GCGAATATGGCGACGGCGCGCTATATGGCTGGCGGCATGAGCACGCAGCAAATGGGCGCGGCGTTTTTAAACTGCATTCA
GTTTGGCGATGTGGCGTTACTCAAGATCCGCAATGGCTTTGGGCAAGTGCTGCGCTTGTTCCCGCTGCCCAGTTACCGGA
CCCGCGTTGCTGGTGACGGTGGCGCAGTGGTGCTTGAGCGGGAAAACACGGTTAAGCGTTATAAAGCCAAAGACATTATT
TGGGTGCGGGTGTATGACCCAGTGCAACAGGTTTATGGCTGCCCCGATTATTTAGGCGGTTTGCAGTCGGCACTATTGAA
TGAAGATTCAACGTTATTCCGCCGCAAATACTACATAAACGGCGCGCACATGGGCTTTATCTTGTATTCCACCGACCCGA
ATTTAGATGCGGACGTCGAGAAAGATATCAAAGAGAAAATCCAAGAATCGAAGGGCGTGGGTAATTTTAAGTCGTTGTTT
GTGAACATACCGAACGGTAAAGAGAAAGGGATTCAGATTATCCCCGTAGGCAATTTTGAATCGAAAGACGAGTTTATGAA
TGTAAAAAACGTCTCTAGCCAAGATGTGTTTAACGCGCATCGGTTCCCCGCTGGTTTGGGCGGGATGATCCCCACGAACA
CGGCTGGCCTTGGCGACCCGACTAAGTATGATGAAGTGTATTTTAAGAGTGAAACCCGCACGCTGATCAACATGTTTGTG
GATGCAGTGAATCGCGACCCCGAGATTGGCAGCAAGTTAAAGTTAGTTTTTGATATGGGGAATGGAGGCGCTGGCGCATA
A

Upstream 100 bases:

>100_bases
CGAGCCGCGACAATGTGACCGGACACGCTGACGTATTTTTCGCGATTGCCCATGCGGTGATCAACGAACCCCTTAACTAT
GAACATAAGAGAACATCATC

Downstream 100 bases:

>100_bases
AGCGCCATTGCATATTATAAACTGCTATTTATTCATGATTTTCATCATATGTCTTTGTCGCATCAGCGTTTGATAATCCA
TTCGTTGATGGCAGAACATA

Product: PBSX family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MGDATLTAANDDTLNTDANGPAKTVVFSMPETVMPNMWLTDYDSLYFNQNDNYWEPPVDRQLLANLTRRNAQHGGIVQSR
ANMATARYMAGGMSTQQMGAAFLNCIQFGDVALLKIRNGFGQVLRLFPLPSYRTRVAGDGGAVVLERENTVKRYKAKDII
WVRVYDPVQQVYGCPDYLGGLQSALLNEDSTLFRRKYYINGAHMGFILYSTDPNLDADVEKDIKEKIQESKGVGNFKSLF
VNIPNGKEKGIQIIPVGNFESKDEFMNVKNVSSQDVFNAHRFPAGLGGMIPTNTAGLGDPTKYDEVYFKSETRTLINMFV
DAVNRDPEIGSKLKLVFDMGNGGAGA

Sequences:

>Translated_346_residues
MGDATLTAANDDTLNTDANGPAKTVVFSMPETVMPNMWLTDYDSLYFNQNDNYWEPPVDRQLLANLTRRNAQHGGIVQSR
ANMATARYMAGGMSTQQMGAAFLNCIQFGDVALLKIRNGFGQVLRLFPLPSYRTRVAGDGGAVVLERENTVKRYKAKDII
WVRVYDPVQQVYGCPDYLGGLQSALLNEDSTLFRRKYYINGAHMGFILYSTDPNLDADVEKDIKEKIQESKGVGNFKSLF
VNIPNGKEKGIQIIPVGNFESKDEFMNVKNVSSQDVFNAHRFPAGLGGMIPTNTAGLGDPTKYDEVYFKSETRTLINMFV
DAVNRDPEIGSKLKLVFDMGNGGAGA
>Mature_345_residues
GDATLTAANDDTLNTDANGPAKTVVFSMPETVMPNMWLTDYDSLYFNQNDNYWEPPVDRQLLANLTRRNAQHGGIVQSRA
NMATARYMAGGMSTQQMGAAFLNCIQFGDVALLKIRNGFGQVLRLFPLPSYRTRVAGDGGAVVLERENTVKRYKAKDIIW
VRVYDPVQQVYGCPDYLGGLQSALLNEDSTLFRRKYYINGAHMGFILYSTDPNLDADVEKDIKEKIQESKGVGNFKSLFV
NIPNGKEKGIQIIPVGNFESKDEFMNVKNVSSQDVFNAHRFPAGLGGMIPTNTAGLGDPTKYDEVYFKSETRTLINMFVD
AVNRDPEIGSKLKLVFDMGNGGAGA

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 38292; Mature: 38161

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDATLTAANDDTLNTDANGPAKTVVFSMPETVMPNMWLTDYDSLYFNQNDNYWEPPVDR
CCCCEEEECCCCCCCCCCCCCCEEEEEECCHHHCCCCCEECCCCEEECCCCCCCCCCCCH
QLLANLTRRNAQHGGIVQSRANMATARYMAGGMSTQQMGAAFLNCIQFGDVALLKIRNGF
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCH
GQVLRLFPLPSYRTRVAGDGGAVVLERENTVKRYKAKDIIWVRVYDPVQQVYGCPDYLGG
HHHHHHHCCCCHHHEECCCCCEEEEECCCHHHHHCCCCEEEEEEECHHHHHCCCHHHHHH
LQSALLNEDSTLFRRKYYINGAHMGFILYSTDPNLDADVEKDIKEKIQESKGVGNFKSLF
HHHHHHCCCCHHEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
VNIPNGKEKGIQIIPVGNFESKDEFMNVKNVSSQDVFNAHRFPAGLGGMIPTNTAGLGDP
EECCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
TKYDEVYFKSETRTLINMFVDAVNRDPEIGSKLKLVFDMGNGGAGA
CCCCCEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
GDATLTAANDDTLNTDANGPAKTVVFSMPETVMPNMWLTDYDSLYFNQNDNYWEPPVDR
CCCEEEECCCCCCCCCCCCCCEEEEEECCHHHCCCCCEECCCCEEECCCCCCCCCCCCH
QLLANLTRRNAQHGGIVQSRANMATARYMAGGMSTQQMGAAFLNCIQFGDVALLKIRNGF
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCH
GQVLRLFPLPSYRTRVAGDGGAVVLERENTVKRYKAKDIIWVRVYDPVQQVYGCPDYLGG
HHHHHHHCCCCHHHEECCCCCEEEEECCCHHHHHCCCCEEEEEEECHHHHHCCCHHHHHH
LQSALLNEDSTLFRRKYYINGAHMGFILYSTDPNLDADVEKDIKEKIQESKGVGNFKSLF
HHHHHHCCCCHHEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
VNIPNGKEKGIQIIPVGNFESKDEFMNVKNVSSQDVFNAHRFPAGLGGMIPTNTAGLGDP
EECCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
TKYDEVYFKSETRTLINMFVDAVNRDPEIGSKLKLVFDMGNGGAGA
CCCCCEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]