Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485596

Identifier: 124485596

GI number: 124485596

Start: 755886

End: 756362

Strand: Reverse

Name: 124485596

Synonym: Mlab_0774

Alternate gene names: NA

Gene position: 756362-755886 (Counterclockwise)

Preceding gene: 124485597

Following gene: 124485594

Centisome position: 41.9

GC content: 48.22

Gene sequence:

>477_bases
ATGAAATATATTCTGGATTCATCCTATTTTTTCGGCGATTATACGCTTGACGGAGAGCTTTTTACCACTCCCGAGGTTGT
CAGCGAACTTAAGGATCTGGCATCTAAGATGCGGTTTGAGATCCTTACGGAGAAAGGACTCGTAACGACCGAGCCGGAAG
CGGAACACATATTTGCAGCGACAAACGCGGCACTCAAAAGCGGGGATGCAAGAGTTCTCTCAGATACGGATATTTCGGTC
ATCGCTCTCGGCCTGACACTGGATGGCACGGTGATTTCCGATGATTTTGCCGTACAAAATGTCTGCCGGCATCTGAAAAT
ATCAACCAAAGGTATTCTGCAGAGAAATGCCAAGAAAAAGGTCTGGAAAAAAATATGTTCGGGATGCGGAGCAGAGATTC
CGGCAGATGAGGAAGACTGTCCTATCTGCGGTTCTGCTCCGATCCGGCGCGGGACGGAAAAAGGAAAACGACGGTAA

Upstream 100 bases:

>100_bases
TTATGCAGGCCGGCCTTGCCGACATTGCATCCTCGGACACGATCGAGCGTGCCTCAAGCAGGATCACGGCATCGGGTGTC
ATAGCAGACGCCATACGTAA

Downstream 100 bases:

>100_bases
CGAATATTTCAGATCAGCCGTCTTCTGATAAACCAGGATATTTTAGCAGCAAGGTTGTGCAGTCCCTCAGTGTATTTTCT
TCTGGAATAATGGATCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKYILDSSYFFGDYTLDGELFTTPEVVSELKDLASKMRFEILTEKGLVTTEPEAEHIFAATNAALKSGDARVLSDTDISV
IALGLTLDGTVISDDFAVQNVCRHLKISTKGILQRNAKKKVWKKICSGCGAEIPADEEDCPICGSAPIRRGTEKGKRR

Sequences:

>Translated_158_residues
MKYILDSSYFFGDYTLDGELFTTPEVVSELKDLASKMRFEILTEKGLVTTEPEAEHIFAATNAALKSGDARVLSDTDISV
IALGLTLDGTVISDDFAVQNVCRHLKISTKGILQRNAKKKVWKKICSGCGAEIPADEEDCPICGSAPIRRGTEKGKRR
>Mature_158_residues
MKYILDSSYFFGDYTLDGELFTTPEVVSELKDLASKMRFEILTEKGLVTTEPEAEHIFAATNAALKSGDARVLSDTDISV
IALGLTLDGTVISDDFAVQNVCRHLKISTKGILQRNAKKKVWKKICSGCGAEIPADEEDCPICGSAPIRRGTEKGKRR

Specific function: Unknown

COG id: COG1439

COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0129 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006596
- InterPro:   IPR022907
- InterPro:   IPR022785 [H]

Pfam domain/function: PF08745 UPF0278 [H]

EC number: NA

Molecular weight: Translated: 17302; Mature: 17302

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYILDSSYFFGDYTLDGELFTTPEVVSELKDLASKMRFEILTEKGLVTTEPEAEHIFAA
CCEEECCCEEECEEEECCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHH
TNAALKSGDARVLSDTDISVIALGLTLDGTVISDDFAVQNVCRHLKISTKGILQRNAKKK
HHHHHHCCCCEEECCCCEEEEEEEEEECCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHH
VWKKICSGCGAEIPADEEDCPICGSAPIRRGTEKGKRR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYILDSSYFFGDYTLDGELFTTPEVVSELKDLASKMRFEILTEKGLVTTEPEAEHIFAA
CCEEECCCEEECEEEECCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHH
TNAALKSGDARVLSDTDISVIALGLTLDGTVISDDFAVQNVCRHLKISTKGILQRNAKKK
HHHHHHCCCCEEECCCCEEEEEEEEEECCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHH
VWKKICSGCGAEIPADEEDCPICGSAPIRRGTEKGKRR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]