| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485594
Identifier: 124485594
GI number: 124485594
Start: 754055
End: 754651
Strand: Reverse
Name: 124485594
Synonym: Mlab_0772
Alternate gene names: NA
Gene position: 754651-754055 (Counterclockwise)
Preceding gene: 124485596
Following gene: 124485593
Centisome position: 41.81
GC content: 50.42
Gene sequence:
>597_bases ATGTCTTCCTTAGAAGAGCTCATGGCAAAAGCAAAAGACCTTCATGCTGAAGGCCACTCATCCGGTCAGATCGCTGATGA ACTCAGCCTCTCGGTCGATACGGTCACCTGGCTTCTGACGCAGGGAAAGGCCGGGATCGCGGCACCGAAAGATGTACATA TCGACTGGACGAACGTCAGTTCGAACACCACACTCCTTGGTGGAATCTCATCCATGATGCTGGCCCATTTTGAGGCAGCA AACGAAGAGGAGGAGGGAGTCGACGCCGTTATCGGAATATCCGTATCGGGTGTACCTCTCGCAACGATGATCGCCGCAGA AGACGGACTCAATCTCGCCATATACCATCCTTCAAAACACAATCCGGAAGGAAAAATCGGATCGATATCCGGAAACTTCA GCAAAGTCTCCCAAAAACGCTGTTTAATTGTGGACGACTGCATCACAACCGGCAACACTCTTACAGAGATCGTAAATTAT CTGCGCCGCCACAAAGCCACCCCGGTTGGCATCTGTGTAATCTTTGATAAGCGCGGTGTCAAGGAAATAGAGGGCGTTCC GGTCTACTCGCTGTTTACAATTAAACGTATCGACTGA
Upstream 100 bases:
>100_bases TTCACTTTTAGTAGGTTTCCCATCTTTTCTGCCGGAAGAACCTGCTTTTCAGCAGAAGTTTCACAAAAGCATATATGCGG AAAAAGCGATTACTTCTCAT
Downstream 100 bases:
>100_bases AGAGTCAATAACCAATACAACATATTTATATAGAAGTCCAATCCACTTTTTTAACATATTAGTACAGGAGAATAACGATT ATGGCAAACAACTCAGGTCA
Product: orotate phosphoribosyltransferase-like protein
Products: orotate; 5-phospho-alpha-D-ribose 1-diphosphate
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSSLEELMAKAKDLHAEGHSSGQIADELSLSVDTVTWLLTQGKAGIAAPKDVHIDWTNVSSNTTLLGGISSMMLAHFEAA NEEEEGVDAVIGISVSGVPLATMIAAEDGLNLAIYHPSKHNPEGKIGSISGNFSKVSQKRCLIVDDCITTGNTLTEIVNY LRRHKATPVGICVIFDKRGVKEIEGVPVYSLFTIKRID
Sequences:
>Translated_198_residues MSSLEELMAKAKDLHAEGHSSGQIADELSLSVDTVTWLLTQGKAGIAAPKDVHIDWTNVSSNTTLLGGISSMMLAHFEAA NEEEEGVDAVIGISVSGVPLATMIAAEDGLNLAIYHPSKHNPEGKIGSISGNFSKVSQKRCLIVDDCITTGNTLTEIVNY LRRHKATPVGICVIFDKRGVKEIEGVPVYSLFTIKRID >Mature_197_residues SSLEELMAKAKDLHAEGHSSGQIADELSLSVDTVTWLLTQGKAGIAAPKDVHIDWTNVSSNTTLLGGISSMMLAHFEAAN EEEEGVDAVIGISVSGVPLATMIAAEDGLNLAIYHPSKHNPEGKIGSISGNFSKVSQKRCLIVDDCITTGNTLTEIVNYL RRHKATPVGICVIFDKRGVKEIEGVPVYSLFTIKRID
Specific function: Unknown
COG id: COG0856
COG function: function code F; Orotate phosphoribosyltransferase homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYREL_METLZ (A2SRI7)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001030210.1 - ProteinModelPortal: A2SRI7 - SMR: A2SRI7 - STRING: A2SRI7 - GeneID: 4794844 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_0772 - eggNOG: arNOG07847 - HOGENOM: HBG497993 - OMA: KDVHIDW - ProtClustDB: PRK02277 - BioCyc: MLAB410358:MLAB_0772-MONOMER - HAMAP: MF_01214 - InterPro: IPR022854 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: 2.4.2.10
Molecular weight: Translated: 21202; Mature: 21071
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLEELMAKAKDLHAEGHSSGQIADELSLSVDTVTWLLTQGKAGIAAPKDVHIDWTNVS CCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHEEEEEECCCCCCCCCCEEEEEEECCC SNTTLLGGISSMMLAHFEAANEEEEGVDAVIGISVSGVPLATMIAAEDGLNLAIYHPSKH CCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEECCCCC NPEGKIGSISGNFSKVSQKRCLIVDDCITTGNTLTEIVNYLRRHKATPVGICVIFDKRGV CCCCCEEECCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC KEIEGVPVYSLFTIKRID HHHCCCCEEEEEEEEECC >Mature Secondary Structure SSLEELMAKAKDLHAEGHSSGQIADELSLSVDTVTWLLTQGKAGIAAPKDVHIDWTNVS CHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHEEEEEECCCCCCCCCCEEEEEEECCC SNTTLLGGISSMMLAHFEAANEEEEGVDAVIGISVSGVPLATMIAAEDGLNLAIYHPSKH CCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEECCCCC NPEGKIGSISGNFSKVSQKRCLIVDDCITTGNTLTEIVNYLRRHKATPVGICVIFDKRGV CCCCCEEECCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC KEIEGVPVYSLFTIKRID HHHCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: orotidine 5'-phosphate; diphosphate
Specific reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA