Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485524

Identifier: 124485524

GI number: 124485524

Start: 672604

End: 674301

Strand: Reverse

Name: 124485524

Synonym: Mlab_0701

Alternate gene names: NA

Gene position: 674301-672604 (Counterclockwise)

Preceding gene: 124485525

Following gene: 124485514

Centisome position: 37.36

GC content: 47.59

Gene sequence:

>1698_bases
ATGATACGACATGCTTTTTCAAAGATCCTCTTTATACTGATAGTTCTTCTTTTCATCTCCGCATCCGGCTGTATTACTCC
CGTTCAGGAGGGCCCGACACTCCAGCCGGTTTCCGAGGAATATTATGCCGAGATGGACGATGTCCTCGACCCGTATATTC
AGACGATCGATGATCAGATGAAGCAGATAACCGCATCGGTCTGGAATGCCGCACGGGAACTCGACGGCGTGCCGGCAGAT
GACCCCTCAGTATATCTGACCATAATGAAACTCAAAAGTGAGATCCCGCTTTCCTATGATGTCGAACGCATCGATAAAGA
TAACGTCCTGACGATGATTACCGGGGAATCAGATAAACTTTCGCTGATCGGCGTGGAGATCATAACTAACCAGTATGCCG
AAGAAGAGTTCAAAGCCGCCGGATCGCAGTGTATCATATCCAAATACACCGCATTCCAAAACGGTGAAAGCGGAATAAAG
GTCAGCGCACCGATCTATGACGCAGAGGGTAATTTTGACGGGACCCTGCAGGTAATTATGGATTCAGGGTATCTCTTCTC
CGGACCGGCGGAGAGACTGAGAACGGAATACGGGTACACCGTTTGGGTCACTCAGGACGACGGGAGCGTGATCTATGATG
AGGATACGCGGCAAATCGGGGTCGATCTCACGAACCCGTCACTAGGGAATACACCTTCATTCACCAAAGCAGCCGCAGAG
ATCCTCAAAAACGAGTCGGGAGATGTATCCTACATTTACTATTCAGCCGAATTGAACAATACTTCTCAGAGGAACGCCAT
ATGGAATACAGTAGAACCCGGATATGGACAAACATGGCGGGTCGTGCTTGTCGACAATTTCCCAAAACCTGGTGAAATTG
AAGAGAGCACAACCACCCCGGAAGAGATAAAAACCTTTGTAGTGAATGCCTTCGTTTATGCCAATAAAGAGGGAGAAGAG
AAGGCACTTGCAGCATTCGATGATCCAAACGGGGAGTTCATTGACGGCGAGATGTATATCTTCGCCGGAGATATGAACGG
CACGATATTGTCACACCCGTATCAGCCGGCCCTTGTCGGGAAGGATTCCTGGTCAGCAGAAGATTCGACCGGAGTGAAAT
ATATACAGAGACAGATCGCCCGGGCACAACAGGGAGGCGGATATGTATTTTATCTGTATCCAAATCCAAACCAGAATTAC
ATAACAGAATTAAAACTGTCCTATGTACTGCCCATTAACAACGAGTGGTTCCTCGGAGCAGGAATGTATGAACATAATGC
CTCGTTTTCCCATACGGTCAGTATCGACTGGCAGAAACGAAATGAATTGATCAGCCAGGTAAGGACCATGCATTATCTTG
CAGCAGTCGATGGTATCTCTTCTGTAACAGAAATGATGATGGATCCGGAAAGTGGATTCCAACGAGAAGGGCTCTATCCA
TTTGCGGTCACGGGAAACGGCACAATTCTTGCTTTTTCCAGCGACAAATCGCTTGTTGGAACAAATCAGTTAGGTTTAAT
CAACTCATACGGCATGTCGTTTGTCCGGGAGGGGATATCTCTCGGTATGTCCGGCGGAGGTCTGATGTATATGCTCACTT
GGGATCAGAATTATCAAAGGGAAGTGTATGTTCTGGATTACGTCGAACCAGTGGGGAATGATACCTACTTTGCCAGTTAC
ATGATCCTGGAGGATTGA

Upstream 100 bases:

>100_bases
TTATCTCTCGAAACATTTCCAAGAAAAATCAGAGAGATAGTCCCACGATAAAAAGATATAAGAACTTTCCCTTTACTATT
GTTCACTAAGGAATCCGATC

Downstream 100 bases:

>100_bases
AGGGGGGGTGTCATATTTTTTTAAATAGGAGTTACGCGGTGTGCTCTCAATCCAATTTGGGAAGGATACGGCTAGGTGTG
GAAACCTGAATTTATGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Cache Type 2 Domain-Containing Protein; Signal Transduction Histidine Kinase-Like

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MIRHAFSKILFILIVLLFISASGCITPVQEGPTLQPVSEEYYAEMDDVLDPYIQTIDDQMKQITASVWNAARELDGVPAD
DPSVYLTIMKLKSEIPLSYDVERIDKDNVLTMITGESDKLSLIGVEIITNQYAEEEFKAAGSQCIISKYTAFQNGESGIK
VSAPIYDAEGNFDGTLQVIMDSGYLFSGPAERLRTEYGYTVWVTQDDGSVIYDEDTRQIGVDLTNPSLGNTPSFTKAAAE
ILKNESGDVSYIYYSAELNNTSQRNAIWNTVEPGYGQTWRVVLVDNFPKPGEIEESTTTPEEIKTFVVNAFVYANKEGEE
KALAAFDDPNGEFIDGEMYIFAGDMNGTILSHPYQPALVGKDSWSAEDSTGVKYIQRQIARAQQGGGYVFYLYPNPNQNY
ITELKLSYVLPINNEWFLGAGMYEHNASFSHTVSIDWQKRNELISQVRTMHYLAAVDGISSVTEMMMDPESGFQREGLYP
FAVTGNGTILAFSSDKSLVGTNQLGLINSYGMSFVREGISLGMSGGGLMYMLTWDQNYQREVYVLDYVEPVGNDTYFASY
MILED

Sequences:

>Translated_565_residues
MIRHAFSKILFILIVLLFISASGCITPVQEGPTLQPVSEEYYAEMDDVLDPYIQTIDDQMKQITASVWNAARELDGVPAD
DPSVYLTIMKLKSEIPLSYDVERIDKDNVLTMITGESDKLSLIGVEIITNQYAEEEFKAAGSQCIISKYTAFQNGESGIK
VSAPIYDAEGNFDGTLQVIMDSGYLFSGPAERLRTEYGYTVWVTQDDGSVIYDEDTRQIGVDLTNPSLGNTPSFTKAAAE
ILKNESGDVSYIYYSAELNNTSQRNAIWNTVEPGYGQTWRVVLVDNFPKPGEIEESTTTPEEIKTFVVNAFVYANKEGEE
KALAAFDDPNGEFIDGEMYIFAGDMNGTILSHPYQPALVGKDSWSAEDSTGVKYIQRQIARAQQGGGYVFYLYPNPNQNY
ITELKLSYVLPINNEWFLGAGMYEHNASFSHTVSIDWQKRNELISQVRTMHYLAAVDGISSVTEMMMDPESGFQREGLYP
FAVTGNGTILAFSSDKSLVGTNQLGLINSYGMSFVREGISLGMSGGGLMYMLTWDQNYQREVYVLDYVEPVGNDTYFASY
MILED
>Mature_565_residues
MIRHAFSKILFILIVLLFISASGCITPVQEGPTLQPVSEEYYAEMDDVLDPYIQTIDDQMKQITASVWNAARELDGVPAD
DPSVYLTIMKLKSEIPLSYDVERIDKDNVLTMITGESDKLSLIGVEIITNQYAEEEFKAAGSQCIISKYTAFQNGESGIK
VSAPIYDAEGNFDGTLQVIMDSGYLFSGPAERLRTEYGYTVWVTQDDGSVIYDEDTRQIGVDLTNPSLGNTPSFTKAAAE
ILKNESGDVSYIYYSAELNNTSQRNAIWNTVEPGYGQTWRVVLVDNFPKPGEIEESTTTPEEIKTFVVNAFVYANKEGEE
KALAAFDDPNGEFIDGEMYIFAGDMNGTILSHPYQPALVGKDSWSAEDSTGVKYIQRQIARAQQGGGYVFYLYPNPNQNY
ITELKLSYVLPINNEWFLGAGMYEHNASFSHTVSIDWQKRNELISQVRTMHYLAAVDGISSVTEMMMDPESGFQREGLYP
FAVTGNGTILAFSSDKSLVGTNQLGLINSYGMSFVREGISLGMSGGGLMYMLTWDQNYQREVYVLDYVEPVGNDTYFASY
MILED

Specific function: Unknown

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62967; Mature: 62967

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRHAFSKILFILIVLLFISASGCITPVQEGPTLQPVSEEYYAEMDDVLDPYIQTIDDQM
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KQITASVWNAARELDGVPADDPSVYLTIMKLKSEIPLSYDVERIDKDNVLTMITGESDKL
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCEEEEEECCCCCE
SLIGVEIITNQYAEEEFKAAGSQCIISKYTAFQNGESGIKVSAPIYDAEGNFDGTLQVIM
EEEEEEEHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCEEEECCEEECCCCCCCEEEEEE
DSGYLFSGPAERLRTEYGYTVWVTQDDGSVIYDEDTRQIGVDLTNPSLGNTPSFTKAAAE
ECCEEECCCHHHHHHHCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHH
ILKNESGDVSYIYYSAELNNTSQRNAIWNTVEPGYGQTWRVVLVDNFPKPGEIEESTTTP
HHHCCCCCEEEEEEEEECCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCH
EEIKTFVVNAFVYANKEGEEKALAAFDDPNGEFIDGEMYIFAGDMNGTILSHPYQPALVG
HHHHHHHEEEEEEECCCCCCCEEEEEECCCCCEECCEEEEEEECCCCCEEECCCCCEEEC
KDSWSAEDSTGVKYIQRQIARAQQGGGYVFYLYPNPNQNYITELKLSYVLPINNEWFLGA
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEC
GMYEHNASFSHTVSIDWQKRNELISQVRTMHYLAAVDGISSVTEMMMDPESGFQREGLYP
CEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
FAVTGNGTILAFSSDKSLVGTNQLGLINSYGMSFVREGISLGMSGGGLMYMLTWDQNYQR
EEEECCCEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
EVYVLDYVEPVGNDTYFASYMILED
EEEEEEEECCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MIRHAFSKILFILIVLLFISASGCITPVQEGPTLQPVSEEYYAEMDDVLDPYIQTIDDQM
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KQITASVWNAARELDGVPADDPSVYLTIMKLKSEIPLSYDVERIDKDNVLTMITGESDKL
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCEEEEEECCCCCE
SLIGVEIITNQYAEEEFKAAGSQCIISKYTAFQNGESGIKVSAPIYDAEGNFDGTLQVIM
EEEEEEEHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCEEEECCEEECCCCCCCEEEEEE
DSGYLFSGPAERLRTEYGYTVWVTQDDGSVIYDEDTRQIGVDLTNPSLGNTPSFTKAAAE
ECCEEECCCHHHHHHHCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHH
ILKNESGDVSYIYYSAELNNTSQRNAIWNTVEPGYGQTWRVVLVDNFPKPGEIEESTTTP
HHHCCCCCEEEEEEEEECCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCH
EEIKTFVVNAFVYANKEGEEKALAAFDDPNGEFIDGEMYIFAGDMNGTILSHPYQPALVG
HHHHHHHEEEEEEECCCCCCCEEEEEECCCCCEECCEEEEEEECCCCCEEECCCCCEEEC
KDSWSAEDSTGVKYIQRQIARAQQGGGYVFYLYPNPNQNYITELKLSYVLPINNEWFLGA
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEC
GMYEHNASFSHTVSIDWQKRNELISQVRTMHYLAAVDGISSVTEMMMDPESGFQREGLYP
CEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
FAVTGNGTILAFSSDKSLVGTNQLGLINSYGMSFVREGISLGMSGGGLMYMLTWDQNYQR
EEEECCCEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
EVYVLDYVEPVGNDTYFASYMILED
EEEEEEEECCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA