| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485442
Identifier: 124485442
GI number: 124485442
Start: 592306
End: 593202
Strand: Reverse
Name: 124485442
Synonym: Mlab_0617
Alternate gene names: NA
Gene position: 593202-592306 (Counterclockwise)
Preceding gene: 124485443
Following gene: 124485439
Centisome position: 32.87
GC content: 55.74
Gene sequence:
>897_bases ATGACCGAAGACGGCTGTCTTTACGCCGTTTCGGGGTATGAAAACGATTCCCGCGCCGAATGCGTGCTGCGCTATGTCCC GACACAGGACGGGGACAGAACAGCGCCGTCCGGGATCCGATATAAAAAATACGATTTTGCCGACGCCTTTGCCTGGGTCA AAGAACACAAACCCGAATACCTTGATCTGGTACACCGTGTTCCCCTCTCAGACATCGTGCGTGTGTTGAAGCCCGAAGAA GAAGCGGCAAACATTGCTGCGAGAAACCCCAGAGTCGCCCGGCTTTTTTCCCACTTTGATCTGCCCCCAATGACCTTTGG ATGCACGGGATCCCTGCTTGCGGGTCTGGAAAATTCCGCGTCCGACATCGACATGGTCGTCTACGGCTCGGCCTGGTTTT TGGCACGCGAGCAGCTGATGGCCGCGGTGAAGGCGGGAAAGATCCCGGAGATGAGCGAAGAGATGTGGCAGAAAGTTTAC CGGAAGCGGGTCCCCGACATCAGTTTCGACGACTTCGTTCTGCACGAGAGCCGGAAGTTCAACCGCGGCGAGTTCGAAGG GACCTACTTCGATCTGCTCTACTCAAGAGGATACGACAATATCAGATCCGTTCCGCCGATCACGCTCGGCGAAAAAACGG GCGTGATGACGATCGAAGCAAAAGTCACCGATGCAAGTCTGGCATTCGATTCGCCCGGGATCTATAAAGTCGACCACGAA GAGATCGACATGGTCTTATCTTTCACGCACACCTACTGCGGCCAGTGTTTCACGGGAGAAACGCTGGAAGCAAAGGGCGT CGTCGAGGAGCACGGGGATCAGACCTGGCTTATCGTCGGAACGACCCGCGAAGCCCACGGCGAGTACATCGTCTCGAGAA CTCTGCTCGATCAGTAA
Upstream 100 bases:
>100_bases CAAAAAATGGAGACAAACTTTCCCTACCTGGATTTACCCGAATAGATGAAAAAAAGAGCCGTGTATTTTTATGAAACCGA TTCGTTTACGTGATTTTGTT
Downstream 100 bases:
>100_bases TTTTTTTAGAAAAGGTGCGGGAGTTTATACTAAACTCCTGTGCCAAATTTAGAAGAACATATCCAGCGTCGTTTTTCGTG ACTTGGTCGGGTCAAACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTEDGCLYAVSGYENDSRAECVLRYVPTQDGDRTAPSGIRYKKYDFADAFAWVKEHKPEYLDLVHRVPLSDIVRVLKPEE EAANIAARNPRVARLFSHFDLPPMTFGCTGSLLAGLENSASDIDMVVYGSAWFLAREQLMAAVKAGKIPEMSEEMWQKVY RKRVPDISFDDFVLHESRKFNRGEFEGTYFDLLYSRGYDNIRSVPPITLGEKTGVMTIEAKVTDASLAFDSPGIYKVDHE EIDMVLSFTHTYCGQCFTGETLEAKGVVEEHGDQTWLIVGTTREAHGEYIVSRTLLDQ
Sequences:
>Translated_298_residues MTEDGCLYAVSGYENDSRAECVLRYVPTQDGDRTAPSGIRYKKYDFADAFAWVKEHKPEYLDLVHRVPLSDIVRVLKPEE EAANIAARNPRVARLFSHFDLPPMTFGCTGSLLAGLENSASDIDMVVYGSAWFLAREQLMAAVKAGKIPEMSEEMWQKVY RKRVPDISFDDFVLHESRKFNRGEFEGTYFDLLYSRGYDNIRSVPPITLGEKTGVMTIEAKVTDASLAFDSPGIYKVDHE EIDMVLSFTHTYCGQCFTGETLEAKGVVEEHGDQTWLIVGTTREAHGEYIVSRTLLDQ >Mature_297_residues TEDGCLYAVSGYENDSRAECVLRYVPTQDGDRTAPSGIRYKKYDFADAFAWVKEHKPEYLDLVHRVPLSDIVRVLKPEEE AANIAARNPRVARLFSHFDLPPMTFGCTGSLLAGLENSASDIDMVVYGSAWFLAREQLMAAVKAGKIPEMSEEMWQKVYR KRVPDISFDDFVLHESRKFNRGEFEGTYFDLLYSRGYDNIRSVPPITLGEKTGVMTIEAKVTDASLAFDSPGIYKVDHEE IDMVLSFTHTYCGQCFTGETLEAKGVVEEHGDQTWLIVGTTREAHGEYIVSRTLLDQ
Specific function: Unknown
COG id: COG1665
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002934 [H]
Pfam domain/function: PF01909 NTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 33654; Mature: 33523
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDGCLYAVSGYENDSRAECVLRYVPTQDGDRTAPSGIRYKKYDFADAFAWVKEHKPEY CCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCHH LDLVHRVPLSDIVRVLKPEEEAANIAARNPRVARLFSHFDLPPMTFGCTGSLLAGLENSA HHHHHHCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCEECCCHHHHHCCCCCC SDIDMVVYGSAWFLAREQLMAAVKAGKIPEMSEEMWQKVYRKRVPDISFDDFVLHESRKF CCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEECCCCC NRGEFEGTYFDLLYSRGYDNIRSVPPITLGEKTGVMTIEAKVTDASLAFDSPGIYKVDHE CCCCCCCHHHHHHHHCCCCCHHCCCCEEECCCCCEEEEEEEECCCEEEECCCCEEEECHH EIDMVLSFTHTYCGQCFTGETLEAKGVVEEHGDQTWLIVGTTREAHGEYIVSRTLLDQ HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCEEEHHHHCCC >Mature Secondary Structure TEDGCLYAVSGYENDSRAECVLRYVPTQDGDRTAPSGIRYKKYDFADAFAWVKEHKPEY CCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCHH LDLVHRVPLSDIVRVLKPEEEAANIAARNPRVARLFSHFDLPPMTFGCTGSLLAGLENSA HHHHHHCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCEECCCHHHHHCCCCCC SDIDMVVYGSAWFLAREQLMAAVKAGKIPEMSEEMWQKVYRKRVPDISFDDFVLHESRKF CCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEECCCCC NRGEFEGTYFDLLYSRGYDNIRSVPPITLGEKTGVMTIEAKVTDASLAFDSPGIYKVDHE CCCCCCCHHHHHHHHCCCCCHHCCCCEEECCCCCEEEEEEEECCCEEEECCCCEEEECHH EIDMVLSFTHTYCGQCFTGETLEAKGVVEEHGDQTWLIVGTTREAHGEYIVSRTLLDQ HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]