| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485439
Identifier: 124485439
GI number: 124485439
Start: 588310
End: 588855
Strand: Reverse
Name: 124485439
Synonym: Mlab_0614
Alternate gene names: NA
Gene position: 588855-588310 (Counterclockwise)
Preceding gene: 124485442
Following gene: 124485438
Centisome position: 32.62
GC content: 49.45
Gene sequence:
>546_bases ATGGCTGAAAGTATCTCCGCACAGGTTCGGTTTTGCCCGGTCCAGGAGTCGGAACTTGGGCGGATCAATGAGTTATGCAA TATCCCCGAGATTGCAGAGCATTTCGAATCCATCCCGCCGGTTTCGATGGAGGCAACAATGGCATTATGGTCTTACATCC AGTCAGGAATCGTTTCTCTCTGGTGCATGCATTACAAAGATCGGATAATCGGCGGTGCCGGCTTTTATTCCCAGCCGCCC GGAACCCGGCTATCCCACAGCGCGACATTTTTTCTGTATATCGAACCGGCGTACTGGGGGATGAGTATCGGTACAAAAGC GATAATGCATCTTGAAGATGAAGCCAAAAAACGCGGATTTATCCGGATGGAATGTCTGGTCGCCGACACGAATCCGCGTG CCGTCTGTCTGTATGAACGGCTGGGATACGAACTGGAAGGAACCAAAAAAATGGCGTTTTATCTTGACGGAAAATACACC GATCTAAAATTTCTCGGAAAGATCTTCTGGGACAATCTGAACGAAGAGGGGCTGCACCACAGATAA
Upstream 100 bases:
>100_bases GTAAGGAGGGAATGACAAAGAATTTCCGGACACCGGCGAGGGTCCCCGACCCGAATTCACCCACGATAAATTTATTGTAT CCGCCTTCCCACACTAGCTC
Downstream 100 bases:
>100_bases GCAGCCCGCTTTCCTTTTTTGCGCATTAGCTTTCCTTTAAGTAATCAGAAATTTTCGGCCGCTTGTTTTATTATTGCCTA TTACCTTTATCTATGTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MAESISAQVRFCPVQESELGRINELCNIPEIAEHFESIPPVSMEATMALWSYIQSGIVSLWCMHYKDRIIGGAGFYSQPP GTRLSHSATFFLYIEPAYWGMSIGTKAIMHLEDEAKKRGFIRMECLVADTNPRAVCLYERLGYELEGTKKMAFYLDGKYT DLKFLGKIFWDNLNEEGLHHR
Sequences:
>Translated_181_residues MAESISAQVRFCPVQESELGRINELCNIPEIAEHFESIPPVSMEATMALWSYIQSGIVSLWCMHYKDRIIGGAGFYSQPP GTRLSHSATFFLYIEPAYWGMSIGTKAIMHLEDEAKKRGFIRMECLVADTNPRAVCLYERLGYELEGTKKMAFYLDGKYT DLKFLGKIFWDNLNEEGLHHR >Mature_180_residues AESISAQVRFCPVQESELGRINELCNIPEIAEHFESIPPVSMEATMALWSYIQSGIVSLWCMHYKDRIIGGAGFYSQPPG TRLSHSATFFLYIEPAYWGMSIGTKAIMHLEDEAKKRGFIRMECLVADTNPRAVCLYERLGYELEGTKKMAFYLDGKYTD LKFLGKIFWDNLNEEGLHHR
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20714; Mature: 20583
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00027 HOMEOBOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESISAQVRFCPVQESELGRINELCNIPEIAEHFESIPPVSMEATMALWSYIQSGIVSL CCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH WCMHYKDRIIGGAGFYSQPPGTRLSHSATFFLYIEPAYWGMSIGTKAIMHLEDEAKKRGF HHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCHHHHEEEHHHHHHCCC IRMECLVADTNPRAVCLYERLGYELEGTKKMAFYLDGKYTDLKFLGKIFWDNLNEEGLHH EEEEEEEECCCCCEEEEEHHCCCEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC R C >Mature Secondary Structure AESISAQVRFCPVQESELGRINELCNIPEIAEHFESIPPVSMEATMALWSYIQSGIVSL CCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH WCMHYKDRIIGGAGFYSQPPGTRLSHSATFFLYIEPAYWGMSIGTKAIMHLEDEAKKRGF HHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCHHHHEEEHHHHHHCCC IRMECLVADTNPRAVCLYERLGYELEGTKKMAFYLDGKYTDLKFLGKIFWDNLNEEGLHH EEEEEEEECCCCCEEEEEHHCCCEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA