| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485443
Identifier: 124485443
GI number: 124485443
Start: 593360
End: 594127
Strand: Reverse
Name: 124485443
Synonym: Mlab_0618
Alternate gene names: NA
Gene position: 594127-593360 (Counterclockwise)
Preceding gene: 124485445
Following gene: 124485442
Centisome position: 32.92
GC content: 36.33
Gene sequence:
>768_bases ATGAAAATATTTTATTTTACGGGCACTGGAAACAGTTTATATGTTGCTAAAAGATTTGAAGGAGAGCTCTATTCCATACC AAAGGTTCTAAGAAGCAATGAATTGCGGTATAAAGATGAGAAAATCGGCATCATATTCCCCTGTTACGGATTAGCTGCTC CGAAAATCGTACGTGAATTTGTAGAGAAGGTGACCCTGGAAAGTCCGTATATCTTTGCTATTTTAACATACGGCAATATG ATATCAAATGGGGTTGGCTGGTTTGCAAACTACGCAAAAAAGCATGGCATCTCTATAAACTATGCAAACAGCCTTTTGAT GGTTGATAATTATCTGCCGATTTTTGACGTTGAAGAACAGAAAAAAAAGCAGAAGAACATAGAAGAAAATTTGAGCGTCT TACTAAAGGATATTTCTGAAAGTAAGGAATACATCAATAAAGGTTCAGTATTAGACGCCATTTTAACGAGTGGATTTCAA CAAGTGACAAAGATCCTTCCCGAGTATAATTCACCAAAAAAATTCTCAATTAATGATGACTGCAGTAATTGCGGGACATG TGTCAGGGTGTGTCCGCGGGATAATATTTCACTTGACAAAGAGCAGGTAAACAGTAAACCAATTCATGGAGATACGTGTG AATTTTGTCTTTCCTGTATCAATCTCTGTCCGAAAAAAGCAATTAAACTAAAATCCGAGAAGAATCCGGATTCCCGGTTT AAAAATGAACATGTGACTCTAAAAGAAATAATAGAGTCTAATAGCTGA
Upstream 100 bases:
>100_bases TTAAGATCTGGTCTTCAGTAGTTCATGGGTTCGAATCCCTTCCCTCGCATTTTTCTCAATCAAATGAATAACCTGAACAT ATTTGTTAAGGGAGTTTATC
Downstream 100 bases:
>100_bases AATTATAGATACGCAATCGAAAAACAGGTGAATGAAACATGTTAGATCGAAAAATGCCAAAAAATGGAGACAAACTTTCC CTACCTGGATTTACCCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: 4Fe-4S Ferredoxin; Flavodoxin; Flavodoxin Domain Containing Protein; Polyferredoxin
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKIFYFTGTGNSLYVAKRFEGELYSIPKVLRSNELRYKDEKIGIIFPCYGLAAPKIVREFVEKVTLESPYIFAILTYGNM ISNGVGWFANYAKKHGISINYANSLLMVDNYLPIFDVEEQKKKQKNIEENLSVLLKDISESKEYINKGSVLDAILTSGFQ QVTKILPEYNSPKKFSINDDCSNCGTCVRVCPRDNISLDKEQVNSKPIHGDTCEFCLSCINLCPKKAIKLKSEKNPDSRF KNEHVTLKEIIESNS
Sequences:
>Translated_255_residues MKIFYFTGTGNSLYVAKRFEGELYSIPKVLRSNELRYKDEKIGIIFPCYGLAAPKIVREFVEKVTLESPYIFAILTYGNM ISNGVGWFANYAKKHGISINYANSLLMVDNYLPIFDVEEQKKKQKNIEENLSVLLKDISESKEYINKGSVLDAILTSGFQ QVTKILPEYNSPKKFSINDDCSNCGTCVRVCPRDNISLDKEQVNSKPIHGDTCEFCLSCINLCPKKAIKLKSEKNPDSRF KNEHVTLKEIIESNS >Mature_255_residues MKIFYFTGTGNSLYVAKRFEGELYSIPKVLRSNELRYKDEKIGIIFPCYGLAAPKIVREFVEKVTLESPYIFAILTYGNM ISNGVGWFANYAKKHGISINYANSLLMVDNYLPIFDVEEQKKKQKNIEENLSVLLKDISESKEYINKGSVLDAILTSGFQ QVTKILPEYNSPKKFSINDDCSNCGTCVRVCPRDNISLDKEQVNSKPIHGDTCEFCLSCINLCPKKAIKLKSEKNPDSRF KNEHVTLKEIIESNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28970; Mature: 28970
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFYFTGTGNSLYVAKRFEGELYSIPKVLRSNELRYKDEKIGIIFPCYGLAAPKIVREF CEEEEEECCCCEEEEEEECCCCHHHHHHHHHCCCCEECCCCEEEEEECHHCCHHHHHHHH VEKVTLESPYIFAILTYGNMISNGVGWFANYAKKHGISINYANSLLMVDNYLPIFDVEEQ HHHHCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCHHH KKKQKNIEENLSVLLKDISESKEYINKGSVLDAILTSGFQQVTKILPEYNSPKKFSINDD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC CSNCGTCVRVCPRDNISLDKEQVNSKPIHGDTCEFCLSCINLCPKKAIKLKSEKNPDSRF CCCCCCEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCHHHH KNEHVTLKEIIESNS CCCCCHHHHHHCCCC >Mature Secondary Structure MKIFYFTGTGNSLYVAKRFEGELYSIPKVLRSNELRYKDEKIGIIFPCYGLAAPKIVREF CEEEEEECCCCEEEEEEECCCCHHHHHHHHHCCCCEECCCCEEEEEECHHCCHHHHHHHH VEKVTLESPYIFAILTYGNMISNGVGWFANYAKKHGISINYANSLLMVDNYLPIFDVEEQ HHHHCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCHHH KKKQKNIEENLSVLLKDISESKEYINKGSVLDAILTSGFQQVTKILPEYNSPKKFSINDD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC CSNCGTCVRVCPRDNISLDKEQVNSKPIHGDTCEFCLSCINLCPKKAIKLKSEKNPDSRF CCCCCCEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCHHHH KNEHVTLKEIIESNS CCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA