Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485436

Identifier: 124485436

GI number: 124485436

Start: 583095

End: 584858

Strand: Reverse

Name: 124485436

Synonym: Mlab_0611

Alternate gene names: NA

Gene position: 584858-583095 (Counterclockwise)

Preceding gene: 124485437

Following gene: 124485435

Centisome position: 32.4

GC content: 50.51

Gene sequence:

>1764_bases
GTGAACGATCCTGGCAAAGTGGACAAAATGCGACTCGCCTATGCATTAGGTTTCGTTACACTTCTTGCCCCGCTGCTCGC
TCTTCTTCTTGCATTCCTCACAAAGAATGTTCTTCTTTCTCTGTTCCTTGGTGTTCTTAACGGGGCCTGGACCCTCTGTC
TTGTTACCGGCACAATTTTTGGTGCAGCATCGGGAGCATTCCTGAACTCGACCGATTATTTTGTCGCAACGATGGCAGAT
CGGTGGGATGCCGGAATTCTCATGCAGGTCCTGGTCATCGGAGCACTGATCGCACTCATCACCCGTATGGGAGGTATGCG
TGGTCTTGCAACGCTGATCACCAAGATCGCCAAAGGTCCCCGCAGTGCACAGGTCGCCATCTGGTTGTCTGGATGGATCA
TCTTCTTCGATGATTATGCAAACGCCCTTATTATTGGTCCTATCATGCGTACGGTCTGCGACAAGTTCCGCATCTCGCGT
GAAAAACTTGCATTCCTCGTAGATTCGACGGCGGCACCGGTCGCAGGAATCGTTCTCGTTTCAACGTGGATCGGAACCGA
AATCGTGAATATCAACACCGGTCTTAGTATTGCAGGCATCACCGACATGTCCGCATTCGGTATCTTCATCGAGACGATTC
CCTACCGGTTCTACAATATTCTCGCACTCTTCTTCGTGCTGGCAACCGGCCTCCTTCTGCGTGAATACGGCCCGATGGCA
AAAGCGGAGATGCGTGCCCGTACAACCGGTCAAACCATCAAACCCGGTTCCGAAGTTGCAACGGAAGAAGACTACGACAA
AGATCCGGAAAAAGCTGAACTCAAGGATGACCACGGCATATTGACGACTTCCAGAAAAGTTCACCCGCCAAATATCTGGA
ATGCAATCATCCCAATCGCCGTTCTGATCATCTCGGCGCTCGTTCTCTTCTACACGAACGGTGTATCCTACATTATGGCA
GGTGAAGGTATCGGCATTCTTCCGAACGGTCAGACCATCACTGCGGAATTGTTTACTCAGATGAGCTTCTTTGAAGGCCT
CACCTATGCATACAGTTCTGCCGATGCAAGTATTGTCCTGTTCCAGGCCGGTCTTCTTGCCTGTATCGTTGCCATCATCA
TGGGTTTTGCCCAGAGGATTTTCACCGTGAAAGAAGGTATAGAGACCTGGGCACATGGTATGAAATCCATGGTCTTCGTC
TGTATCGTCCTGATTCTTGCCTGGTCGATCGGATCAGTTATCAGCGATCTTGGTACGTCCTATTTCATTTCCGGTATTTT
CTCAGATTCCATCCCGCTTTGGATCGTGCCCGCACTGATCTTCATCATTGCAGCTTTGATCTCTTTTGCAACAGGAACTG
CGTATGGAACAATGGCGATTCTTCTGCCGCTGTGCATCCCTCTTGCAGCCGTTATCGGAGGAGGAGTTATCAACGGTGAA
GCAGTAGATCCGCTCTTCATTGTGCTTTGCTCATCAGCGGTTCTTACCGGAGCCATCTTTGGTGATCACTGTTCTCCGAT
CTCGGATACGACGATTCTGTCATCGATGGGTTCTGGATGCGGTCTGATGGATCACGTTCAAACACAGATAGGCTACGCAA
TGACGATCGCCGTGATTTCCGTAGCGGCATATCTCCTGATCGGCCTTGGCCTTCCAATCTGGATCGTTCTTCCAATCGGT
GCTGCGCTGTGTGTCGCGGCCCTTCTGATCCTCGGCAAAAAAATGCCGACCTGGGATCCGAAAACGGAAAAACTTCTCGA
GTAA

Upstream 100 bases:

>100_bases
CACAATCCCCGATGAAGACTCCGGATTTATTTCTTGGTATGAAAATCACCCGGCAGCAACACTAGGTGAAGATTCCACCG
GTGTTTACGCCGAAGATGTC

Downstream 100 bases:

>100_bases
ACTCGGGAACATCATCCCATTTCCTTTTTACTTCGCAGATTTCAAGTATTCATACTGTCAACGTGTTTAAGCGTGTATTC
CGTCATCACAAGTCCACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIFGAASGAFLNSTDYFVATMAD
RWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGPRSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISR
EKLAFLVDSTAAPVAGIVLVSTWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA
KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIAVLIISALVLFYTNGVSYIMA
GEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVLFQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFV
CIVLILAWSIGSVISDLGTSYFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE
AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVISVAAYLLIGLGLPIWIVLPIG
AALCVAALLILGKKMPTWDPKTEKLLE

Sequences:

>Translated_587_residues
MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIFGAASGAFLNSTDYFVATMAD
RWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGPRSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISR
EKLAFLVDSTAAPVAGIVLVSTWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA
KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIAVLIISALVLFYTNGVSYIMA
GEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVLFQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFV
CIVLILAWSIGSVISDLGTSYFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE
AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVISVAAYLLIGLGLPIWIVLPIG
AALCVAALLILGKKMPTWDPKTEKLLE
>Mature_587_residues
MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIFGAASGAFLNSTDYFVATMAD
RWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGPRSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISR
EKLAFLVDSTAAPVAGIVLVSTWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA
KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIAVLIISALVLFYTNGVSYIMA
GEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVLFQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFV
CIVLILAWSIGSVISDLGTSYFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE
AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVISVAAYLLIGLGLPIWIVLPIG
AALCVAALLILGKKMPTWDPKTEKLLE

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 62598; Mature: 62598

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GAASGAFLNSTDYFVATMADRWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGP
HCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
RSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISREKLAFLVDSTAAPVAGIVLV
CCCEEEEEEECEEEEEECCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHH
STWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA
HHHHCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIA
HHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
VLIISALVLFYTNGVSYIMAGEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVL
HHHHHHHHHHHHCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFVCIVLILAWSIGSVISDLGTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVIS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VAAYLLIGLGLPIWIVLPIGAALCVAALLILGKKMPTWDPKTEKLLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GAASGAFLNSTDYFVATMADRWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGP
HCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
RSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISREKLAFLVDSTAAPVAGIVLV
CCCEEEEEEECEEEEEECCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHH
STWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA
HHHHCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIA
HHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
VLIISALVLFYTNGVSYIMAGEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVL
HHHHHHHHHHHHCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFVCIVLILAWSIGSVISDLGTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVIS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VAAYLLIGLGLPIWIVLPIGAALCVAALLILGKKMPTWDPKTEKLLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]