| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485436
Identifier: 124485436
GI number: 124485436
Start: 583095
End: 584858
Strand: Reverse
Name: 124485436
Synonym: Mlab_0611
Alternate gene names: NA
Gene position: 584858-583095 (Counterclockwise)
Preceding gene: 124485437
Following gene: 124485435
Centisome position: 32.4
GC content: 50.51
Gene sequence:
>1764_bases GTGAACGATCCTGGCAAAGTGGACAAAATGCGACTCGCCTATGCATTAGGTTTCGTTACACTTCTTGCCCCGCTGCTCGC TCTTCTTCTTGCATTCCTCACAAAGAATGTTCTTCTTTCTCTGTTCCTTGGTGTTCTTAACGGGGCCTGGACCCTCTGTC TTGTTACCGGCACAATTTTTGGTGCAGCATCGGGAGCATTCCTGAACTCGACCGATTATTTTGTCGCAACGATGGCAGAT CGGTGGGATGCCGGAATTCTCATGCAGGTCCTGGTCATCGGAGCACTGATCGCACTCATCACCCGTATGGGAGGTATGCG TGGTCTTGCAACGCTGATCACCAAGATCGCCAAAGGTCCCCGCAGTGCACAGGTCGCCATCTGGTTGTCTGGATGGATCA TCTTCTTCGATGATTATGCAAACGCCCTTATTATTGGTCCTATCATGCGTACGGTCTGCGACAAGTTCCGCATCTCGCGT GAAAAACTTGCATTCCTCGTAGATTCGACGGCGGCACCGGTCGCAGGAATCGTTCTCGTTTCAACGTGGATCGGAACCGA AATCGTGAATATCAACACCGGTCTTAGTATTGCAGGCATCACCGACATGTCCGCATTCGGTATCTTCATCGAGACGATTC CCTACCGGTTCTACAATATTCTCGCACTCTTCTTCGTGCTGGCAACCGGCCTCCTTCTGCGTGAATACGGCCCGATGGCA AAAGCGGAGATGCGTGCCCGTACAACCGGTCAAACCATCAAACCCGGTTCCGAAGTTGCAACGGAAGAAGACTACGACAA AGATCCGGAAAAAGCTGAACTCAAGGATGACCACGGCATATTGACGACTTCCAGAAAAGTTCACCCGCCAAATATCTGGA ATGCAATCATCCCAATCGCCGTTCTGATCATCTCGGCGCTCGTTCTCTTCTACACGAACGGTGTATCCTACATTATGGCA GGTGAAGGTATCGGCATTCTTCCGAACGGTCAGACCATCACTGCGGAATTGTTTACTCAGATGAGCTTCTTTGAAGGCCT CACCTATGCATACAGTTCTGCCGATGCAAGTATTGTCCTGTTCCAGGCCGGTCTTCTTGCCTGTATCGTTGCCATCATCA TGGGTTTTGCCCAGAGGATTTTCACCGTGAAAGAAGGTATAGAGACCTGGGCACATGGTATGAAATCCATGGTCTTCGTC TGTATCGTCCTGATTCTTGCCTGGTCGATCGGATCAGTTATCAGCGATCTTGGTACGTCCTATTTCATTTCCGGTATTTT CTCAGATTCCATCCCGCTTTGGATCGTGCCCGCACTGATCTTCATCATTGCAGCTTTGATCTCTTTTGCAACAGGAACTG CGTATGGAACAATGGCGATTCTTCTGCCGCTGTGCATCCCTCTTGCAGCCGTTATCGGAGGAGGAGTTATCAACGGTGAA GCAGTAGATCCGCTCTTCATTGTGCTTTGCTCATCAGCGGTTCTTACCGGAGCCATCTTTGGTGATCACTGTTCTCCGAT CTCGGATACGACGATTCTGTCATCGATGGGTTCTGGATGCGGTCTGATGGATCACGTTCAAACACAGATAGGCTACGCAA TGACGATCGCCGTGATTTCCGTAGCGGCATATCTCCTGATCGGCCTTGGCCTTCCAATCTGGATCGTTCTTCCAATCGGT GCTGCGCTGTGTGTCGCGGCCCTTCTGATCCTCGGCAAAAAAATGCCGACCTGGGATCCGAAAACGGAAAAACTTCTCGA GTAA
Upstream 100 bases:
>100_bases CACAATCCCCGATGAAGACTCCGGATTTATTTCTTGGTATGAAAATCACCCGGCAGCAACACTAGGTGAAGATTCCACCG GTGTTTACGCCGAAGATGTC
Downstream 100 bases:
>100_bases ACTCGGGAACATCATCCCATTTCCTTTTTACTTCGCAGATTTCAAGTATTCATACTGTCAACGTGTTTAAGCGTGTATTC CGTCATCACAAGTCCACACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIFGAASGAFLNSTDYFVATMAD RWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGPRSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISR EKLAFLVDSTAAPVAGIVLVSTWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIAVLIISALVLFYTNGVSYIMA GEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVLFQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFV CIVLILAWSIGSVISDLGTSYFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVISVAAYLLIGLGLPIWIVLPIG AALCVAALLILGKKMPTWDPKTEKLLE
Sequences:
>Translated_587_residues MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIFGAASGAFLNSTDYFVATMAD RWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGPRSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISR EKLAFLVDSTAAPVAGIVLVSTWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIAVLIISALVLFYTNGVSYIMA GEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVLFQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFV CIVLILAWSIGSVISDLGTSYFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVISVAAYLLIGLGLPIWIVLPIG AALCVAALLILGKKMPTWDPKTEKLLE >Mature_587_residues MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIFGAASGAFLNSTDYFVATMAD RWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGPRSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISR EKLAFLVDSTAAPVAGIVLVSTWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIAVLIISALVLFYTNGVSYIMA GEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVLFQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFV CIVLILAWSIGSVISDLGTSYFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVISVAAYLLIGLGLPIWIVLPIG AALCVAALLILGKKMPTWDPKTEKLLE
Specific function: Unknown
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018461 [H]
Pfam domain/function: PF03553 Na_H_antiporter [H]
EC number: NA
Molecular weight: Translated: 62598; Mature: 62598
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GAASGAFLNSTDYFVATMADRWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGP HCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC RSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISREKLAFLVDSTAAPVAGIVLV CCCEEEEEEECEEEEEECCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHH STWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA HHHHCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIA HHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH VLIISALVLFYTNGVSYIMAGEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVL HHHHHHHHHHHHCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH FQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFVCIVLILAWSIGSVISDLGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVIS CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VAAYLLIGLGLPIWIVLPIGAALCVAALLILGKKMPTWDPKTEKLLE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC >Mature Secondary Structure MNDPGKVDKMRLAYALGFVTLLAPLLALLLAFLTKNVLLSLFLGVLNGAWTLCLVTGTIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GAASGAFLNSTDYFVATMADRWDAGILMQVLVIGALIALITRMGGMRGLATLITKIAKGP HCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC RSAQVAIWLSGWIIFFDDYANALIIGPIMRTVCDKFRISREKLAFLVDSTAAPVAGIVLV CCCEEEEEEECEEEEEECCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHH STWIGTEIVNINTGLSIAGITDMSAFGIFIETIPYRFYNILALFFVLATGLLLREYGPMA HHHHCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KAEMRARTTGQTIKPGSEVATEEDYDKDPEKAELKDDHGILTTSRKVHPPNIWNAIIPIA HHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH VLIISALVLFYTNGVSYIMAGEGIGILPNGQTITAELFTQMSFFEGLTYAYSSADASIVL HHHHHHHHHHHHCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH FQAGLLACIVAIIMGFAQRIFTVKEGIETWAHGMKSMVFVCIVLILAWSIGSVISDLGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFISGIFSDSIPLWIVPALIFIIAALISFATGTAYGTMAILLPLCIPLAAVIGGGVINGE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC AVDPLFIVLCSSAVLTGAIFGDHCSPISDTTILSSMGSGCGLMDHVQTQIGYAMTIAVIS CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VAAYLLIGLGLPIWIVLPIGAALCVAALLILGKKMPTWDPKTEKLLE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]