Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265771
Identifier: 124265771
GI number: 124265771
Start: 608376
End: 609002
Strand: Direct
Name: 124265771
Synonym: Mpe_A0578
Alternate gene names: NA
Gene position: 608376-609002 (Clockwise)
Preceding gene: 124265770
Following gene: 124265776
Centisome position: 15.04
GC content: 69.06
Gene sequence:
>627_bases ATGCGCGCGATCCTGTTGTCCCTGCTTGCTTCGTTTGCGGCACCAGCATGGTGCGAAGACGACATCCTGGCCGTGCTGCA GCGTTCGCAGCAGATGCAGCTCGACGCGCTGACCGAGGCCCAGGTCGACGACGCCGACCCTGCCGTGCAGGTGGTTCGCC GCAGCTTCCAGCGGGTCCTGGACGCGGCAGACGCGCCCGGTGACGTCCGCTTGCTGGTCGTGCGGGGGCCGCTGCTCGCG GTGTGCCTGATGGGGCGCGTGGTCGCCGCGAACGTGTCGCTCGCCGACATGAGCGAGAGCGAGCGCAGCTTCGTGCTGGC CCACGAGCTCGGCCACGTGATGCATCGCCACTGGGCTCAGCTCGGACAACTCTACAAGCGACACATCCCCGGGGAGGTGG TGCAGGCGCACACCGACGCCATCGCCGGCGTGCTGGGCCGTGAGGCCTCGCAGCTGTCGCACGAGCACGAATACGAGGCC GATGCCTTCGCGATGCGGCTGATCCGGCATCTGGGCGAGCCCGAGGACACGCCGCTGGTCCTGTTCCAGCACCTGCCGAT GATCAAGGCCACCGCCACCCACCCGGGCACCCAGCAGCGCGTGGTGCACCTGCGTACCCTGCAGTAG
Upstream 100 bases:
>100_bases ATCGGCAGGAGCGCACGGACTTCACCCGTTTTGTGCGAATCTGGTACGGCGATTGCATGGAATCTAGGGTCAACCCTGAT ATTGACGTGCGGAGGTTCTG
Downstream 100 bases:
>100_bases GGCCGGACGGTCAGCGGCCCGGTTCGATGCCCGGGTATTGCGGCAGCGCGTCGTCGATCGTCCACCACGCCGCCTTCGAC GCCACGTGGATGTGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MRAILLSLLASFAAPAWCEDDILAVLQRSQQMQLDALTEAQVDDADPAVQVVRRSFQRVLDAADAPGDVRLLVVRGPLLA VCLMGRVVAANVSLADMSESERSFVLAHELGHVMHRHWAQLGQLYKRHIPGEVVQAHTDAIAGVLGREASQLSHEHEYEA DAFAMRLIRHLGEPEDTPLVLFQHLPMIKATATHPGTQQRVVHLRTLQ
Sequences:
>Translated_208_residues MRAILLSLLASFAAPAWCEDDILAVLQRSQQMQLDALTEAQVDDADPAVQVVRRSFQRVLDAADAPGDVRLLVVRGPLLA VCLMGRVVAANVSLADMSESERSFVLAHELGHVMHRHWAQLGQLYKRHIPGEVVQAHTDAIAGVLGREASQLSHEHEYEA DAFAMRLIRHLGEPEDTPLVLFQHLPMIKATATHPGTQQRVVHLRTLQ >Mature_208_residues MRAILLSLLASFAAPAWCEDDILAVLQRSQQMQLDALTEAQVDDADPAVQVVRRSFQRVLDAADAPGDVRLLVVRGPLLA VCLMGRVVAANVSLADMSESERSFVLAHELGHVMHRHWAQLGQLYKRHIPGEVVQAHTDAIAGVLGREASQLSHEHEYEA DAFAMRLIRHLGEPEDTPLVLFQHLPMIKATATHPGTQQRVVHLRTLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23003; Mature: 23003
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILLSLLASFAAPAWCEDDILAVLQRSQQMQLDALTEAQVDDADPAVQVVRRSFQRVL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DAADAPGDVRLLVVRGPLLAVCLMGRVVAANVSLADMSESERSFVLAHELGHVMHRHWAQ HHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH LGQLYKRHIPGEVVQAHTDAIAGVLGREASQLSHEHEYEADAFAMRLIRHLGEPEDTPLV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCH LFQHLPMIKATATHPGTQQRVVHLRTLQ HHHHCCHHHCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MRAILLSLLASFAAPAWCEDDILAVLQRSQQMQLDALTEAQVDDADPAVQVVRRSFQRVL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DAADAPGDVRLLVVRGPLLAVCLMGRVVAANVSLADMSESERSFVLAHELGHVMHRHWAQ HHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH LGQLYKRHIPGEVVQAHTDAIAGVLGREASQLSHEHEYEADAFAMRLIRHLGEPEDTPLV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCH LFQHLPMIKATATHPGTQQRVVHLRTLQ HHHHCCHHHCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA