Click here to switch to the map view.

The map label for this gene is fliR [H]

Identifier: 124265770

GI number: 124265770

Start: 607489

End: 608259

Strand: Direct

Name: fliR [H]

Synonym: Mpe_A0577

Alternate gene names: 124265770

Gene position: 607489-608259 (Clockwise)

Preceding gene: 124265769

Following gene: 124265771

Centisome position: 15.02

GC content: 66.8

Gene sequence:

>771_bases
ATGTTCACCTTCGACGAGGCCCAGCTCACCGCGTGGCTGAGCCCGATGGTCTGGCCCTTCCTGCGGGTGCTGGCGCTGTT
CATCAGCGCCCCGGTGCTGAGCATGCGCAGCGTGCCGGTGCGGGTGAAGGTGGCGCTGGCCTTCTTCATCACCATCGCGG
CCCAGGCCTCGCTGCCGCCGATGCCGGTGATCGCGCTCGACAGCGCACAGGCCTTCGAGGCGGTGATCCAGCAGCTGGTG
ATCGGACTGGCCCTCGGCTTCTCGGCGCGCATCGTCATGGCCGGCATCGAGTTCGCCGGCGAGATGATCGGTCTGCAGAT
GGGCCTGAACTTCGCGGCCTTCTTCGATCCCATCAGCGCCTCGCAATCCACCGCGGTCAGCCGCTTCTTCGGCACCAGCG
CAGCCTGGCTGTTCGTCGTGATGAACGGTCACCTGCTGCTGACCGCGGCCGTGATCCAGAGCTTCCATGCCTTCCCGGTG
GCCACGCCCGAGGCCGCACCGCTCGCCTTCCTGTCGGCCCTGCAACCGCAGCTCTGGGGCGCGGAGGTGTTCCGCCTCGG
GCTGTGGATCGCGCTGCCGATCATCACGATGCTGCTGTTCATGAACCTCGTGCTGGGCCTGATCTCGCGCGTGGCCTCGC
AGATCAACATCTTCGCGATCGGCTTCCCGATCACGCTCGGCGTCGGCCTGGTCGGCATCACGCTGACCCTGCCCTTCATG
GAACAGCCGTTCACGATGGCGCTGGAGCGGATGCTGGCGCAGTTCCAGTAG

Upstream 100 bases:

>100_bases
CACGATCGTCGAGTACCTGCAGCGCACGCTGCAGGCGATCCCGACCGTCGTCGGCTAGCCGCCTCAGCGGCCGGCGGATG
CCGCCCCCGACGAACCGACC

Downstream 100 bases:

>100_bases
CGGCCGGACGGCCTGGATCGGCAGGAGCGCACGGACTTCACCCGTTTTGTGCGAATCTGGTACGGCGATTGCATGGAATC
TAGGGTCAACCCTGATATTG

Product: flagellar biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFTFDEAQLTAWLSPMVWPFLRVLALFISAPVLSMRSVPVRVKVALAFFITIAAQASLPPMPVIALDSAQAFEAVIQQLV
IGLALGFSARIVMAGIEFAGEMIGLQMGLNFAAFFDPISASQSTAVSRFFGTSAAWLFVVMNGHLLLTAAVIQSFHAFPV
ATPEAAPLAFLSALQPQLWGAEVFRLGLWIALPIITMLLFMNLVLGLISRVASQINIFAIGFPITLGVGLVGITLTLPFM
EQPFTMALERMLAQFQ

Sequences:

>Translated_256_residues
MFTFDEAQLTAWLSPMVWPFLRVLALFISAPVLSMRSVPVRVKVALAFFITIAAQASLPPMPVIALDSAQAFEAVIQQLV
IGLALGFSARIVMAGIEFAGEMIGLQMGLNFAAFFDPISASQSTAVSRFFGTSAAWLFVVMNGHLLLTAAVIQSFHAFPV
ATPEAAPLAFLSALQPQLWGAEVFRLGLWIALPIITMLLFMNLVLGLISRVASQINIFAIGFPITLGVGLVGITLTLPFM
EQPFTMALERMLAQFQ
>Mature_256_residues
MFTFDEAQLTAWLSPMVWPFLRVLALFISAPVLSMRSVPVRVKVALAFFITIAAQASLPPMPVIALDSAQAFEAVIQQLV
IGLALGFSARIVMAGIEFAGEMIGLQMGLNFAAFFDPISASQSTAVSRFFGTSAAWLFVVMNGHLLLTAAVIQSFHAFPV
ATPEAAPLAFLSALQPQLWGAEVFRLGLWIALPIITMLLFMNLVLGLISRVASQINIFAIGFPITLGVGLVGITLTLPFM
EQPFTMALERMLAQFQ

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=249, Percent_Identity=43.3734939759036, Blast_Score=141, Evalue=4e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27680; Mature: 27680

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTFDEAQLTAWLSPMVWPFLRVLALFISAPVLSMRSVPVRVKVALAFFITIAAQASLPP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
MPVIALDSAQAFEAVIQQLVIGLALGFSARIVMAGIEFAGEMIGLQMGLNFAAFFDPISA
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
SQSTAVSRFFGTSAAWLFVVMNGHLLLTAAVIQSFHAFPVATPEAAPLAFLSALQPQLWG
CHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHH
AEVFRLGLWIALPIITMLLFMNLVLGLISRVASQINIFAIGFPITLGVGLVGITLTLPFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHEECCCC
EQPFTMALERMLAQFQ
CCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFTFDEAQLTAWLSPMVWPFLRVLALFISAPVLSMRSVPVRVKVALAFFITIAAQASLPP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
MPVIALDSAQAFEAVIQQLVIGLALGFSARIVMAGIEFAGEMIGLQMGLNFAAFFDPISA
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
SQSTAVSRFFGTSAAWLFVVMNGHLLLTAAVIQSFHAFPVATPEAAPLAFLSALQPQLWG
CHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHH
AEVFRLGLWIALPIITMLLFMNLVLGLISRVASQINIFAIGFPITLGVGLVGITLTLPFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHEECCCC
EQPFTMALERMLAQFQ
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]