Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265776

Identifier: 124265776

GI number: 124265776

Start: 611840

End: 612271

Strand: Direct

Name: 124265776

Synonym: Mpe_A0583

Alternate gene names: NA

Gene position: 611840-612271 (Clockwise)

Preceding gene: 124265771

Following gene: 124265777

Centisome position: 15.13

GC content: 70.83

Gene sequence:

>432_bases
ATGCCACAAGCCCAGATCTCCGCCGAACCGGCGTTGCCGCTGCTGCTGGCTGCGGACCTGCAGGACCATCTGATGATGGC
CAGCAACGATCTCGACCGCCTGCAGCGCCTGCTCGCCGACACCTGCGATGCGCTGATGCAGCGCTTCCACGGCGCCGTCG
GCCAGCTGGACGGTGGCGACGCGATCGACGCCGGCACCGTGCGCGACGTGCGCCGCCTGCTCGGCGAAGCCGTCACGGCC
CTGCAGTTCCAGGACATGGCCTCGCAACTGATCGCCCACACCCACCAGCGCCTGCGCAACTGCGCCGACCAGCTGGCGCG
CGACGCGTTCGGCGCCGACGGCGACGGCGAGGCGGTGATCGCCCCCCCGCCGCTGCGTCCGAATCCCGTGACGCAGGACG
AAATGGACGCCGGCACCGTCGAGCTGTTCTAG

Upstream 100 bases:

>100_bases
TTGTGCCAAGCCGCACCCGACCGGAGGCAGCGCGCCCCGGGCGCGTGAGGACGGGCGCACGCCCGCAGCGTTCGCGCTGC
GCCCACTTGCGAAGACAACG

Downstream 100 bases:

>100_bases
CGCGGTGTCGCCGCACTCAAGTAGTTCCTCCAGCAACCGATAAGTCACCGAGAAATCCGGAGAGCGCAATGCATTCAATC
CTGGCCGTGGACGATTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPQAQISAEPALPLLLAADLQDHLMMASNDLDRLQRLLADTCDALMQRFHGAVGQLDGGDAIDAGTVRDVRRLLGEAVTA
LQFQDMASQLIAHTHQRLRNCADQLARDAFGADGDGEAVIAPPPLRPNPVTQDEMDAGTVELF

Sequences:

>Translated_143_residues
MPQAQISAEPALPLLLAADLQDHLMMASNDLDRLQRLLADTCDALMQRFHGAVGQLDGGDAIDAGTVRDVRRLLGEAVTA
LQFQDMASQLIAHTHQRLRNCADQLARDAFGADGDGEAVIAPPPLRPNPVTQDEMDAGTVELF
>Mature_142_residues
PQAQISAEPALPLLLAADLQDHLMMASNDLDRLQRLLADTCDALMQRFHGAVGQLDGGDAIDAGTVRDVRRLLGEAVTAL
QFQDMASQLIAHTHQRLRNCADQLARDAFGADGDGEAVIAPPPLRPNPVTQDEMDAGTVELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15382; Mature: 15250

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQAQISAEPALPLLLAADLQDHLMMASNDLDRLQRLLADTCDALMQRFHGAVGQLDGGD
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AIDAGTVRDVRRLLGEAVTALQFQDMASQLIAHTHQRLRNCADQLARDAFGADGDGEAVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
APPPLRPNPVTQDEMDAGTVELF
ECCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
PQAQISAEPALPLLLAADLQDHLMMASNDLDRLQRLLADTCDALMQRFHGAVGQLDGGD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AIDAGTVRDVRRLLGEAVTALQFQDMASQLIAHTHQRLRNCADQLARDAFGADGDGEAVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
APPPLRPNPVTQDEMDAGTVELF
ECCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA