Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265708
Identifier: 124265708
GI number: 124265708
Start: 553522
End: 554427
Strand: Direct
Name: 124265708
Synonym: Mpe_A0515
Alternate gene names: NA
Gene position: 553522-554427 (Clockwise)
Preceding gene: 124265707
Following gene: 124265710
Centisome position: 13.69
GC content: 69.54
Gene sequence:
>906_bases GTGACGACGGAGCGCGAACCCCGCGCCGCGCGCATCGATGCGCCGGCGGCCCTGGCGCTGGTCTGCTGCTGCGCGCTTTG GGGATTGAACCAAGTCGCCATCAAGGCCGCGCTGCCCGAGGTCGGGTCGCTGATCCAGTTGTCCGTTCGCAGCGTGGTCG CCCTGGTGCTGGTCCTGGCCTGGATGCGCTGGCGCCGCATTCCCTGGCACTGGCGTGACGGCACGCTGTGGCCCGGCCTG CTCGCGGGCCTGCTGTTCGCCATCGAATTCGGGTGCATCTTCGTCGGCTTGCAGTACACGACGGCCGCCCGGTCAGTCGT GTTCATCAACACCTCGCCGTTCGTCGTTGCCCTGGTGCTCGCGTGGCTGGTGCCGGCCGAGCGGCTGCGGCCCCTGCAGG CGCTCGGCCTGGCCATCGCCTTCGGTGGGGTCGCTTTCGCGTTTGCCGAGCCTGCGCCTCGGGCGGACGGTTGGCCATGG CTGGGCGATGCGCTGATCCTCGTTGCGGCGGCGTTGTGGGGGTTGACCACTGTGATCATCCGCTTCAGTTCGCTGCGCCA TGCTGCGCCCGAGAAGACGCTGGCCTACCAACTGCTTGTTTCGGCGCTGCTGTCGCCGGCGGCTGCCTGGGTGAGCGGCG CGCCCTGGCCGGCCGCCTGGAGCGCGCTGGCCATCGGCTCGCTGTTCTATCAGGCGGTGATCGTCACCTTCGCCAGTTAT CTGCTGTGGTTCGGGTTGCTCACGCGTTATCCGGCGACCAAGGTGCAGGCTTTCGTGTTCCTCACGCCGGTGTTCGGCGC GGCCTTCGCCGCCGGCCTGCTGGAGGAGCCGGTGGGCGTCGAGTTGCTGGTGGCGCTCGTGGCGGTGGCTGTGGGGCTGA GCCTGCTCAACCGCCGGCACCGCTGA
Upstream 100 bases:
>100_bases CGAATCTCGTGCTGGCCTGACGAGAACTCTTGCGTCTGCGCTCTGGCTGTCCCCGAATCCCCCGCATCCGGTGCTCCCGA CGCGGTGCGGAGCACCCCGC
Downstream 100 bases:
>100_bases CGCCGACGCAGGGCCTCAGCGCGGACCTTCGGGCGTCGTCTCACCGTCGGCGGCTTCCATGGGCGCCTCGCCGTTGGAGC GCTCTTCGTCCTCCCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLAWMRWRRIPWHWRDGTLWPGL LAGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVLAWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPW LGDALILVAAALWGLTTVIIRFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASY LLWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRHR
Sequences:
>Translated_301_residues MTTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLAWMRWRRIPWHWRDGTLWPGL LAGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVLAWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPW LGDALILVAAALWGLTTVIIRFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASY LLWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRHR >Mature_300_residues TTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLAWMRWRRIPWHWRDGTLWPGLL AGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVLAWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPWL GDALILVAAALWGLTTVIIRFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASYL LWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRHR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32419; Mature: 32288
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMRWRRIPWHWRDGTLWPGLLAGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHH AWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPWLGDALILVAAALWGLTTVII HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRH HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC R C >Mature Secondary Structure TTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLA CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMRWRRIPWHWRDGTLWPGLLAGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHH AWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPWLGDALILVAAALWGLTTVII HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRH HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]