Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265708

Identifier: 124265708

GI number: 124265708

Start: 553522

End: 554427

Strand: Direct

Name: 124265708

Synonym: Mpe_A0515

Alternate gene names: NA

Gene position: 553522-554427 (Clockwise)

Preceding gene: 124265707

Following gene: 124265710

Centisome position: 13.69

GC content: 69.54

Gene sequence:

>906_bases
GTGACGACGGAGCGCGAACCCCGCGCCGCGCGCATCGATGCGCCGGCGGCCCTGGCGCTGGTCTGCTGCTGCGCGCTTTG
GGGATTGAACCAAGTCGCCATCAAGGCCGCGCTGCCCGAGGTCGGGTCGCTGATCCAGTTGTCCGTTCGCAGCGTGGTCG
CCCTGGTGCTGGTCCTGGCCTGGATGCGCTGGCGCCGCATTCCCTGGCACTGGCGTGACGGCACGCTGTGGCCCGGCCTG
CTCGCGGGCCTGCTGTTCGCCATCGAATTCGGGTGCATCTTCGTCGGCTTGCAGTACACGACGGCCGCCCGGTCAGTCGT
GTTCATCAACACCTCGCCGTTCGTCGTTGCCCTGGTGCTCGCGTGGCTGGTGCCGGCCGAGCGGCTGCGGCCCCTGCAGG
CGCTCGGCCTGGCCATCGCCTTCGGTGGGGTCGCTTTCGCGTTTGCCGAGCCTGCGCCTCGGGCGGACGGTTGGCCATGG
CTGGGCGATGCGCTGATCCTCGTTGCGGCGGCGTTGTGGGGGTTGACCACTGTGATCATCCGCTTCAGTTCGCTGCGCCA
TGCTGCGCCCGAGAAGACGCTGGCCTACCAACTGCTTGTTTCGGCGCTGCTGTCGCCGGCGGCTGCCTGGGTGAGCGGCG
CGCCCTGGCCGGCCGCCTGGAGCGCGCTGGCCATCGGCTCGCTGTTCTATCAGGCGGTGATCGTCACCTTCGCCAGTTAT
CTGCTGTGGTTCGGGTTGCTCACGCGTTATCCGGCGACCAAGGTGCAGGCTTTCGTGTTCCTCACGCCGGTGTTCGGCGC
GGCCTTCGCCGCCGGCCTGCTGGAGGAGCCGGTGGGCGTCGAGTTGCTGGTGGCGCTCGTGGCGGTGGCTGTGGGGCTGA
GCCTGCTCAACCGCCGGCACCGCTGA

Upstream 100 bases:

>100_bases
CGAATCTCGTGCTGGCCTGACGAGAACTCTTGCGTCTGCGCTCTGGCTGTCCCCGAATCCCCCGCATCCGGTGCTCCCGA
CGCGGTGCGGAGCACCCCGC

Downstream 100 bases:

>100_bases
CGCCGACGCAGGGCCTCAGCGCGGACCTTCGGGCGTCGTCTCACCGTCGGCGGCTTCCATGGGCGCCTCGCCGTTGGAGC
GCTCTTCGTCCTCCCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLAWMRWRRIPWHWRDGTLWPGL
LAGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVLAWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPW
LGDALILVAAALWGLTTVIIRFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASY
LLWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRHR

Sequences:

>Translated_301_residues
MTTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLAWMRWRRIPWHWRDGTLWPGL
LAGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVLAWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPW
LGDALILVAAALWGLTTVIIRFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASY
LLWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRHR
>Mature_300_residues
TTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLAWMRWRRIPWHWRDGTLWPGLL
AGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVLAWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPWL
GDALILVAAALWGLTTVIIRFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASYL
LWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRHR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32419; Mature: 32288

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMRWRRIPWHWRDGTLWPGLLAGLLFAIEFGCIFVGLQYTTAARSVVFINTSPFVVALVL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHH
AWLVPAERLRPLQALGLAIAFGGVAFAFAEPAPRADGWPWLGDALILVAAALWGLTTVII
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RFSSLRHAAPEKTLAYQLLVSALLSPAAAWVSGAPWPAAWSALAIGSLFYQAVIVTFASY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLWFGLLTRYPATKVQAFVFLTPVFGAAFAAGLLEEPVGVELLVALVAVAVGLSLLNRRH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure 
TTEREPRAARIDAPAALALVCCCALWGLNQVAIKAALPEVGSLIQLSVRSVVALVLVLA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]