Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is proB
Identifier: 124265707
GI number: 124265707
Start: 552323
End: 553441
Strand: Direct
Name: proB
Synonym: Mpe_A0514
Alternate gene names: 124265707
Gene position: 552323-553441 (Clockwise)
Preceding gene: 124265706
Following gene: 124265708
Centisome position: 13.66
GC content: 66.93
Gene sequence:
>1119_bases ATGTCCGAAGTGCTGCGTGGAGCGAGGCGCATCGTCGTCAAGGTCGGATCCAGCCTCGTGACCAACGAGGGGCGCGGTGT CGATGCCGCCGCGATCGGCAACTGGTGCCGCCAGCTCGCGTCGCTGGCGGGTCAGGGGCGCGAGGTGCTGATGGTGTCCA GCGGCGCGATCGCCGAAGGCATGAAGCGCTTGGGCTGGAACGCGCGACCGAAGGAGATTCATGAGTTGCAGGCCGCTGCC GCCGTCGGACAGATGGGGCTGGCGCAGATGTACGAGAGCAAGCTTTCGGAGCATGGCATCGGCAGCGCGCAGGTGCTGTT GACGCACGCCGACCTCGCGGACCGCGAGCGCTACCTGAACGCACGCTCGACCCTGCTCACCCTGTTGTCACTGAAGGTGA TCCCGGTCATCAACGAGAACGACACGGTCGTCAACGACGAGATCAAGTTCGGCGACAACGACACGCTGGGCGCACTGGTC GCCAACCTCGTCGACGCTGATGCGCTGGTGATCCTGACCGATCAGCCTGGCCTGTATTCCGCCGATCCGCGCAAGGACCC GCAGGCCCGGTTCATCGGTGAGGCTGTCGCCGGAACGCCGGAACTCGAGCGGATGGCAGGTGGTGCGGGCTCCAGCCTCG GGCGTGGCGGCATGATCACCAAGGTGCTGGCCGCCAAGCGTGCCTCCAGCAGCGGGGCCTCGACCGTTATCGCCTGGGGT CGTGAACCCGACGTGCTGCTGCGACTCGCTGACGGTGAGGCGATCGGCACGCTGCTGGTCGCTCGCACTGCCAAGCTCGC GGCGCGCAAGCAGTGGATGGCCGACCATCTGCAGATGCGCGGCACGGTCGTCATCGACGACGGCGCCGTCGCCAAGCTGC GCGACGAAGGCAAGAGTCTGCTGCCGATCGGCGTGGTCGAGGTGCAGGGCGAGTTCGTGCGAGGTGACGTGATCGCGGTG CGGAGCCAGGTCGGTATCGAAATCGCGCGGGGCCTGGCCAACTACGCGAGCAGCGAGGCGCGGCTGATCGCGCGCAAGCC GTCGTCGCAGATCGAGAGTCTGCTGGGCTACAGCAACGAGCCCGAGATGATCCACCGCACGAATCTCGTGCTGGCCTGA
Upstream 100 bases:
>100_bases GGCCGACGAGAGCGATGACGAGCCCCGCTTTGCACCGCAGGCGGATGACCCGCGCTTCCGTTGAAGCGCGCCTGTTTCGG ACCGAGAGAGTAGAGGCCGC
Downstream 100 bases:
>100_bases CGAGAACTCTTGCGTCTGCGCTCTGGCTGTCCCCGAATCCCCCGCATCCGGTGCTCCCGACGCGGTGCGGAGCACCCCGC GTGACGACGGAGCGCGAACC
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSEVLRGARRIVVKVGSSLVTNEGRGVDAAAIGNWCRQLASLAGQGREVLMVSSGAIAEGMKRLGWNARPKEIHELQAAA AVGQMGLAQMYESKLSEHGIGSAQVLLTHADLADRERYLNARSTLLTLLSLKVIPVINENDTVVNDEIKFGDNDTLGALV ANLVDADALVILTDQPGLYSADPRKDPQARFIGEAVAGTPELERMAGGAGSSLGRGGMITKVLAAKRASSSGASTVIAWG REPDVLLRLADGEAIGTLLVARTAKLAARKQWMADHLQMRGTVVIDDGAVAKLRDEGKSLLPIGVVEVQGEFVRGDVIAV RSQVGIEIARGLANYASSEARLIARKPSSQIESLLGYSNEPEMIHRTNLVLA
Sequences:
>Translated_372_residues MSEVLRGARRIVVKVGSSLVTNEGRGVDAAAIGNWCRQLASLAGQGREVLMVSSGAIAEGMKRLGWNARPKEIHELQAAA AVGQMGLAQMYESKLSEHGIGSAQVLLTHADLADRERYLNARSTLLTLLSLKVIPVINENDTVVNDEIKFGDNDTLGALV ANLVDADALVILTDQPGLYSADPRKDPQARFIGEAVAGTPELERMAGGAGSSLGRGGMITKVLAAKRASSSGASTVIAWG REPDVLLRLADGEAIGTLLVARTAKLAARKQWMADHLQMRGTVVIDDGAVAKLRDEGKSLLPIGVVEVQGEFVRGDVIAV RSQVGIEIARGLANYASSEARLIARKPSSQIESLLGYSNEPEMIHRTNLVLA >Mature_371_residues SEVLRGARRIVVKVGSSLVTNEGRGVDAAAIGNWCRQLASLAGQGREVLMVSSGAIAEGMKRLGWNARPKEIHELQAAAA VGQMGLAQMYESKLSEHGIGSAQVLLTHADLADRERYLNARSTLLTLLSLKVIPVINENDTVVNDEIKFGDNDTLGALVA NLVDADALVILTDQPGLYSADPRKDPQARFIGEAVAGTPELERMAGGAGSSLGRGGMITKVLAAKRASSSGASTVIAWGR EPDVLLRLADGEAIGTLLVARTAKLAARKQWMADHLQMRGTVVIDDGAVAKLRDEGKSLLPIGVVEVQGEFVRGDVIAVR SQVGIEIARGLANYASSEARLIARKPSSQIESLLGYSNEPEMIHRTNLVLA
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI62912457, Length=288, Percent_Identity=33.6805555555556, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI21361368, Length=290, Percent_Identity=33.1034482758621, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI1786437, Length=363, Percent_Identity=43.5261707988981, Blast_Score=276, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17569969, Length=272, Percent_Identity=34.5588235294118, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17569967, Length=278, Percent_Identity=33.8129496402878, Blast_Score=134, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6320506, Length=420, Percent_Identity=34.7619047619048, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6321822, Length=419, Percent_Identity=33.1742243436754, Blast_Score=190, Evalue=3e-49, Organism=Drosophila melanogaster, GI21357643, Length=291, Percent_Identity=33.6769759450172, Blast_Score=138, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_METPP (A2SD37)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019711.1 - ProteinModelPortal: A2SD37 - STRING: A2SD37 - GeneID: 4787090 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0514 - NMPDR: fig|279263.3.peg.2758 - eggNOG: COG0263 - HOGENOM: HBG507643 - OMA: TFGDNDM - PhylomeDB: A2SD37 - ProtClustDB: PRK05429 - BioCyc: MPET420662:MPE_A0514-MONOMER - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 39425; Mature: 39294
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVLRGARRIVVKVGSSLVTNEGRGVDAAAIGNWCRQLASLAGQGREVLMVSSGAIAEG CCHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH MKRLGWNARPKEIHELQAAAAVGQMGLAQMYESKLSEHGIGSAQVLLTHADLADRERYLN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHH ARSTLLTLLSLKVIPVINENDTVVNDEIKFGDNDTLGALVANLVDADALVILTDQPGLYS HHHHHHHHHHHHEEEEECCCCCEECCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCC ADPRKDPQARFIGEAVAGTPELERMAGGAGSSLGRGGMITKVLAAKRASSSGASTVIAWG CCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEC REPDVLLRLADGEAIGTLLVARTAKLAARKQWMADHLQMRGTVVIDDGAVAKLRDEGKSL CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHCCCCC LPIGVVEVQGEFVRGDVIAVRSQVGIEIARGLANYASSEARLIARKPSSQIESLLGYSNE CEEEEEEECCCEECCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCC PEMIHRTNLVLA CCCEECCCEEEC >Mature Secondary Structure SEVLRGARRIVVKVGSSLVTNEGRGVDAAAIGNWCRQLASLAGQGREVLMVSSGAIAEG CHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH MKRLGWNARPKEIHELQAAAAVGQMGLAQMYESKLSEHGIGSAQVLLTHADLADRERYLN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHH ARSTLLTLLSLKVIPVINENDTVVNDEIKFGDNDTLGALVANLVDADALVILTDQPGLYS HHHHHHHHHHHHEEEEECCCCCEECCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCC ADPRKDPQARFIGEAVAGTPELERMAGGAGSSLGRGGMITKVLAAKRASSSGASTVIAWG CCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEC REPDVLLRLADGEAIGTLLVARTAKLAARKQWMADHLQMRGTVVIDDGAVAKLRDEGKSL CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHCCCCC LPIGVVEVQGEFVRGDVIAVRSQVGIEIARGLANYASSEARLIARKPSSQIESLLGYSNE CEEEEEEECCCEECCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCC PEMIHRTNLVLA CCCEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA