Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is obg
Identifier: 124265706
GI number: 124265706
Start: 551174
End: 552286
Strand: Direct
Name: obg
Synonym: Mpe_A0513
Alternate gene names: 124265706
Gene position: 551174-552286 (Clockwise)
Preceding gene: 124265705
Following gene: 124265707
Centisome position: 13.63
GC content: 66.31
Gene sequence:
>1113_bases ATGAAATTCGTTGACGAGGCTTACATCGACGTGATCGCCGGCAACGGCGGCAACGGCTGCGTGAGCTTTCGGCGCGAGAA GTTCATCCCATTCGGCGGTCCGAACGGTGGCGATGGCGGGCGTGGCGGTAGCGTCTACGCGGTGGCCGACCGGAACCTCA ACACCCTGATAGATTTCCGTTTCGCTCGGCGACACGAGGCCCGCCATGGTGAGCACGGCCGCGGTTCCGATCAGTTCGGC GCGGCCGCAGAAGATATCGTGATGCGCATGCCGGTGGGCACCATCATCAGCGATGCCGAGACCGGCGCGCCGGTCGCCGA ATTGCTTGAGCCGGGCGAGCGCATCCTGATCGCCAAGGGCGGCGACGGCGGCTTCGGCAACCTTCACTACAAGACCAGCA CCAACCGCGCACCCCGCCAGAAGACACCGGGCTGGCCCGGCGAGCAGAAGAAGCTCAAGCTGGAACTGCGCGTGCTCGCC GACGTGGGCCTGCTGGGCATGCCGAACGCCGGCAAGTCCACGCTGATCAGCGCGATCTCGAACGCCCGGCCGAAGATTGC CGACTATCCCTTCACGACGCTGCATCCCAACCTTGGCGTGGTGCGCGTCGGACCGGAGCAGAGCTTCGTCGTTGCCGACG TGCCCGGGTTGATCGAGGGAGCGGCCGAGGGCGCCGGGCTGGGCCACCGCTTCCTGCGTCACCTGCAGCGCACCCGGCTG CTGCTTCACATGATCGACATGGCGCCGTTCGACGACACCGATCCGGTCGCACAGGCGAAGGCGATCGTCGCCGAGTTGAA GAAGTACGACCCGGCGCTGTACGACAAGCCGCGCTGGCTGGTACTCAACAAGCTCGACGTCGTGCCGGCCGAGGAGCGTG CCGCGCGCGTGAAGGATTTCGTCAAGCGCTTCAAGTGGAAGGGGCCGGTCTTCGAGATCTCGGCGCTGACGCGCGAGGGC TGCGAGACGCTGGTGCAGGCGATCTACCAGCACGTGGCCAGCTATCAGACCCACTATGTCGATCCCGACGTGCGCTTCGC CGAGCCCGAGGCCGACGAGAGCGATGACGAGCCCCGCTTTGCACCGCAGGCGGATGACCCGCGCTTCCGTTGA
Upstream 100 bases:
>100_bases CGCGCTTGGCGCCGCGACGAAGCCCCGGCCCGCCGGGGCTTTTTCGTTGCAGAGCTCCAGATAACATCTCACTGGCTCGT TCGAGCAACAGGCATTCCCC
Downstream 100 bases:
>100_bases AGCGCGCCTGTTTCGGACCGAGAGAGTAGAGGCCGCATGTCCGAAGTGCTGCGTGGAGCGAGGCGCATCGTCGTCAAGGT CGGATCCAGCCTCGTGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: GTP-binding protein obg
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKFVDEAYIDVIAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGSVYAVADRNLNTLIDFRFARRHEARHGEHGRGSDQFG AAAEDIVMRMPVGTIISDAETGAPVAELLEPGERILIAKGGDGGFGNLHYKTSTNRAPRQKTPGWPGEQKKLKLELRVLA DVGLLGMPNAGKSTLISAISNARPKIADYPFTTLHPNLGVVRVGPEQSFVVADVPGLIEGAAEGAGLGHRFLRHLQRTRL LLHMIDMAPFDDTDPVAQAKAIVAELKKYDPALYDKPRWLVLNKLDVVPAEERAARVKDFVKRFKWKGPVFEISALTREG CETLVQAIYQHVASYQTHYVDPDVRFAEPEADESDDEPRFAPQADDPRFR
Sequences:
>Translated_370_residues MKFVDEAYIDVIAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGSVYAVADRNLNTLIDFRFARRHEARHGEHGRGSDQFG AAAEDIVMRMPVGTIISDAETGAPVAELLEPGERILIAKGGDGGFGNLHYKTSTNRAPRQKTPGWPGEQKKLKLELRVLA DVGLLGMPNAGKSTLISAISNARPKIADYPFTTLHPNLGVVRVGPEQSFVVADVPGLIEGAAEGAGLGHRFLRHLQRTRL LLHMIDMAPFDDTDPVAQAKAIVAELKKYDPALYDKPRWLVLNKLDVVPAEERAARVKDFVKRFKWKGPVFEISALTREG CETLVQAIYQHVASYQTHYVDPDVRFAEPEADESDDEPRFAPQADDPRFR >Mature_370_residues MKFVDEAYIDVIAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGSVYAVADRNLNTLIDFRFARRHEARHGEHGRGSDQFG AAAEDIVMRMPVGTIISDAETGAPVAELLEPGERILIAKGGDGGFGNLHYKTSTNRAPRQKTPGWPGEQKKLKLELRVLA DVGLLGMPNAGKSTLISAISNARPKIADYPFTTLHPNLGVVRVGPEQSFVVADVPGLIEGAAEGAGLGHRFLRHLQRTRL LLHMIDMAPFDDTDPVAQAKAIVAELKKYDPALYDKPRWLVLNKLDVVPAEERAARVKDFVKRFKWKGPVFEISALTREG CETLVQAIYQHVASYQTHYVDPDVRFAEPEADESDDEPRFAPQADDPRFR
Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t
COG id: COG0536
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI24308117, Length=323, Percent_Identity=40.5572755417957, Blast_Score=188, Evalue=6e-48, Organism=Homo sapiens, GI111955139, Length=350, Percent_Identity=35.1428571428571, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI111955063, Length=250, Percent_Identity=34.4, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI58761500, Length=136, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1789574, Length=332, Percent_Identity=55.421686746988, Blast_Score=340, Evalue=1e-94, Organism=Escherichia coli, GI1787454, Length=257, Percent_Identity=26.4591439688716, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790615, Length=157, Percent_Identity=32.484076433121, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17508313, Length=328, Percent_Identity=39.6341463414634, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17552324, Length=310, Percent_Identity=30.3225806451613, Blast_Score=135, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17509631, Length=139, Percent_Identity=32.3741007194245, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6321962, Length=195, Percent_Identity=36.4102564102564, Blast_Score=125, Evalue=1e-29, Organism=Drosophila melanogaster, GI24585318, Length=307, Percent_Identity=37.785016286645, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI20129375, Length=329, Percent_Identity=37.6899696048632, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24640873, Length=135, Percent_Identity=31.1111111111111, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24640877, Length=135, Percent_Identity=31.1111111111111, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24640875, Length=135, Percent_Identity=31.1111111111111, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): OBG_METPP (A2SD36)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019710.1 - ProteinModelPortal: A2SD36 - SMR: A2SD36 - STRING: A2SD36 - GeneID: 4787089 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0513 - NMPDR: fig|279263.3.peg.2757 - eggNOG: COG0536 - HOGENOM: HBG716038 - OMA: LIDYRFN - PhylomeDB: A2SD36 - ProtClustDB: PRK12299 - BioCyc: MPET420662:MPE_A0513-MONOMER - GO: GO:0005737 - HAMAP: MF_01454 - InterPro: IPR014100 - InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR006169 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:2.70.210.12 - PANTHER: PTHR11702:SF3 - PIRSF: PIRSF002401 - PRINTS: PR00326 - TIGRFAMs: TIGR02729 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; SSF82051 GTP1_OBG_sub
EC number: NA
Molecular weight: Translated: 40576; Mature: 40576
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00905 GTP1_OBG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVDEAYIDVIAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGSVYAVADRNLNTLIDFR CCCCCCEEEEEEECCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH FARRHEARHGEHGRGSDQFGAAAEDIVMRMPVGTIISDAETGAPVAELLEPGERILIAKG HHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCEEEEEEC GDGGFGNLHYKTSTNRAPRQKTPGWPGEQKKLKLELRVLADVGLLGMPNAGKSTLISAIS CCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHH NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADVPGLIEGAAEGAGLGHRFLRHLQRTRL CCCCCCCCCCCEEECCCCCEEEECCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHH LLHMIDMAPFDDTDPVAQAKAIVAELKKYDPALYDKPRWLVLNKLDVVPAEERAARVKDF HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH VKRFKWKGPVFEISALTREGCETLVQAIYQHVASYQTHYVDPDVRFAEPEADESDDEPRF HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCC APQADDPRFR CCCCCCCCCC >Mature Secondary Structure MKFVDEAYIDVIAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGSVYAVADRNLNTLIDFR CCCCCCEEEEEEECCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH FARRHEARHGEHGRGSDQFGAAAEDIVMRMPVGTIISDAETGAPVAELLEPGERILIAKG HHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCEEEEEEC GDGGFGNLHYKTSTNRAPRQKTPGWPGEQKKLKLELRVLADVGLLGMPNAGKSTLISAIS CCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHH NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADVPGLIEGAAEGAGLGHRFLRHLQRTRL CCCCCCCCCCCEEECCCCCEEEECCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHH LLHMIDMAPFDDTDPVAQAKAIVAELKKYDPALYDKPRWLVLNKLDVVPAEERAARVKDF HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH VKRFKWKGPVFEISALTREGCETLVQAIYQHVASYQTHYVDPDVRFAEPEADESDDEPRF HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCC APQADDPRFR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA