Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265695

Identifier: 124265695

GI number: 124265695

Start: 542155

End: 543066

Strand: Direct

Name: 124265695

Synonym: Mpe_A0502

Alternate gene names: NA

Gene position: 542155-543066 (Clockwise)

Preceding gene: 124265694

Following gene: 124265696

Centisome position: 13.41

GC content: 68.86

Gene sequence:

>912_bases
ATGAATCCCGAGTTTCTTTCCTTGATGCAGCAGGCCGAGCGCGTGCTCGCGCGGCTCGATGCCCTGCTGCCGGGGCCGGG
CGCCCGGCCGGTGACGGCGCCGGACTGGTCGGCATCGATCGCCTTCCGCTACCGCCGGCGGGGTGCCTCGCTGCTGGGAG
GCGGCTGGCTGGAGCCGGTCCGGCACGTGGCATCGATCCGGCTGGCCGACCTGAAGGAGGTCGAGCCCCAGAAGGAGCGC
CTGGTGCGCAACAGCGAGCAATTCGTCAGCGGCCGGCCGGCCAACAACGTGCTGCTGACCGGCGCGCGTGGGACCGGCAA
GTCCTCGCTGGTGAAGGCCTGCCTGAACGAGTTCGCGCCGCGCGGACTGCGCTTGATCGAGATCGACAAGGCCGATCTGG
TGGATCTGCCCGACATCGTCGACTTGGTGGCCGAACGCGACGAGCGCTTCCTGGTGTTCTGCGACGACCTCAGCTTCGAC
GAGGGCGAGCCGGGCTACAAGGCGCTGAAGTCCATCCTCGACGGCTCGGTGGCGCAGTCGAGCGACAACGTGCTGATCGT
GGCGACGTCCAACCGCCGCCACCTGCTGCCCGAATACATGAAGGAGAACCTCAGCTACCAGCACACCGAGGATGGCGAGG
TGCATCCCGGCGAGGTGGTGGAGGAGAAGATCTCGCTGTCCGAACGCTTCGGGTTGTGGATCAGCTTCTATCCGTTCAGT
CAGGACGAGTACCTGGCGATCGTCGCGCAGTGGCTGAGCGCCTTCGGCGCCGACGCGGACCACATCGCCGCGGCGCGACC
CGAGGCGCTGGTCTGGGCGCTGGAGCGGGGTTCGCGCTCGGGCCGGGTGGCCTGGCAGTTCGCGCGTGACTACGCGGGGC
GCGGCCGTCAGCGCGACGAGGTGCCGGGGTGA

Upstream 100 bases:

>100_bases
TGCCGAGCGAACACCTCGACGCGGCACTGCGGCAACTCGCCACCTGATCCGGCCCCGCCCCGGCGAGGGGCTTCGGCGCC
CGCCCCTACACTCGGCGGCC

Downstream 100 bases:

>100_bases
GCGAGCGCATGCCGGTCGATGTGGCGGTCGGGGTGCTGTTCGACGCGCAGGGGCGCTTCCTGATGACCTCGCGGCCGGAC
GGCAAGGTGTATGCCGGCTA

Product: AAA ATPase family protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPVRHVASIRLADLKEVEPQKER
LVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAPRGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFD
EGEPGYKALKSILDGSVAQSSDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS
QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDEVPG

Sequences:

>Translated_303_residues
MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPVRHVASIRLADLKEVEPQKER
LVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAPRGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFD
EGEPGYKALKSILDGSVAQSSDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS
QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDEVPG
>Mature_303_residues
MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPVRHVASIRLADLKEVEPQKER
LVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAPRGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFD
EGEPGYKALKSILDGSVAQSSDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS
QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDEVPG

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33714; Mature: 33714

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHH
RHVASIRLADLKEVEPQKERLVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAP
HHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
RGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFDEGEPGYKALKSILDGSVAQS
CCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC
SDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS
CCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDE
CCHHHHHHHHHHHHHCCCHHHHHHCCCHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC
VPG
CCC
>Mature Secondary Structure
MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHH
RHVASIRLADLKEVEPQKERLVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAP
HHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
RGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFDEGEPGYKALKSILDGSVAQS
CCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC
SDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS
CCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDE
CCHHHHHHHHHHHHHCCCHHHHHHCCCHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC
VPG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA