Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265665
Identifier: 124265665
GI number: 124265665
Start: 511794
End: 512690
Strand: Direct
Name: 124265665
Synonym: Mpe_A0472
Alternate gene names: NA
Gene position: 511794-512690 (Clockwise)
Preceding gene: 124265664
Following gene: 124265666
Centisome position: 12.66
GC content: 68.78
Gene sequence:
>897_bases ATGGGGGCGGTGGCGCAGGCGGATCCGACCACGCTGGACTACCGCCTCAGCGCGCGGGCGCTGGCGCCGGACGTCTATGT GGTGGAGGGCGCAAATGCCGACTTTTCGCGCGCCAACGGCTGCAACATCATCAATACTGGCTTCATCGTCGTCGATGATG GTGTCATCGTCATCAACACCGGGCCATCGAAACGCTACGGCGAACAGCTGCGGGCGCTGGTCGGGCGCACCACCGGCAAG CCGGTGAAGCAGGTGCTGCACCTGAATCTCCACCCCGACTACTTCCTCGGCAACCAGGCCTTCGCCGACGTGCCGCGCCT GGCGACCTCCGCCACGATCGAGGGCATGCGGGCCGAAGCCAAGTCCTACGAGGACAACCTCTACCGCCTCTGCGGCGACT GGATGAAGGCCACCGAGGCGCTGCTGCCCGATCGGACGGTGGCGCCGGGGCCGCTGCTCGCTGGGAACCCGCGCTTCGAG CTGCGGGAGCTGAAGGGGCACACCGCCTCCGATCTGGTGCTGGTCGACCGGATCTCGGGTGTGGTGTTCGCCGGCGGCCT GGTGTTCGTCGACCGGGTGCCGACCACGCCCCACGCCAGGCTGCCGGACTGGCTGGCCAGCCTGGATGCGCTGGCGGCGC AGCCGTTCAAGACCCTGGTGCCCAGTCACGGGCCGGTGGTCGGCGACGCTCGCGGGATCGAGCAGACCCGGCGCTACCTG CGCTGGCTGGACGGCAGCTTCGGCGCGGCGGCACAGAGAGGCTCGGAGATGACCGAGGTGCTGGCACAGCCGGTGCCGGC CGAGTTCCGCAACTGGGCGGCGTTCGCGACCGAATACCCGCGCAACGTGGTACACCTTTACCCTGCCTACGAACTCAAAT CGCTCCAGGCGCGCTGA
Upstream 100 bases:
>100_bases CCCTCGAGGGGGCGACGCTGGCGGGCCGGCAGAGCCGAACCCGCGGCGTCTGCTGGCCTGGGGCAGGGCTTTGCTCGGCG TTTTGCTTTGCGGTGCAGCA
Downstream 100 bases:
>100_bases AGCAGGCGGTGCTCCACGCGGAGACAGCCCGGACACCGGATTGCGGTGAAACCCGCAGTCAAACCCGGAAATTCTCCCGA TCGGTCCGTGGCACGGGCCT
Product: hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta Lactamase; Beta-Lactamase-Like; Beta-Lactamase; Hydrolase; Zn-Dependent Hydrolase Or Glyoxylase; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Domain Protein; Metal Dependent Hydrolase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MGAVAQADPTTLDYRLSARALAPDVYVVEGANADFSRANGCNIINTGFIVVDDGVIVINTGPSKRYGEQLRALVGRTTGK PVKQVLHLNLHPDYFLGNQAFADVPRLATSATIEGMRAEAKSYEDNLYRLCGDWMKATEALLPDRTVAPGPLLAGNPRFE LRELKGHTASDLVLVDRISGVVFAGGLVFVDRVPTTPHARLPDWLASLDALAAQPFKTLVPSHGPVVGDARGIEQTRRYL RWLDGSFGAAAQRGSEMTEVLAQPVPAEFRNWAAFATEYPRNVVHLYPAYELKSLQAR
Sequences:
>Translated_298_residues MGAVAQADPTTLDYRLSARALAPDVYVVEGANADFSRANGCNIINTGFIVVDDGVIVINTGPSKRYGEQLRALVGRTTGK PVKQVLHLNLHPDYFLGNQAFADVPRLATSATIEGMRAEAKSYEDNLYRLCGDWMKATEALLPDRTVAPGPLLAGNPRFE LRELKGHTASDLVLVDRISGVVFAGGLVFVDRVPTTPHARLPDWLASLDALAAQPFKTLVPSHGPVVGDARGIEQTRRYL RWLDGSFGAAAQRGSEMTEVLAQPVPAEFRNWAAFATEYPRNVVHLYPAYELKSLQAR >Mature_297_residues GAVAQADPTTLDYRLSARALAPDVYVVEGANADFSRANGCNIINTGFIVVDDGVIVINTGPSKRYGEQLRALVGRTTGKP VKQVLHLNLHPDYFLGNQAFADVPRLATSATIEGMRAEAKSYEDNLYRLCGDWMKATEALLPDRTVAPGPLLAGNPRFEL RELKGHTASDLVLVDRISGVVFAGGLVFVDRVPTTPHARLPDWLASLDALAAQPFKTLVPSHGPVVGDARGIEQTRRYLR WLDGSFGAAAQRGSEMTEVLAQPVPAEFRNWAAFATEYPRNVVHLYPAYELKSLQAR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32452; Mature: 32321
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVAQADPTTLDYRLSARALAPDVYVVEGANADFSRANGCNIINTGFIVVDDGVIVINT CCCCCCCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCCCCCEEECCEEEEECCEEEEEC GPSKRYGEQLRALVGRTTGKPVKQVLHLNLHPDYFLGNQAFADVPRLATSATIEGMRAEA CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH KSYEDNLYRLCGDWMKATEALLPDRTVAPGPLLAGNPRFELRELKGHTASDLVLVDRISG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCC VVFAGGLVFVDRVPTTPHARLPDWLASLDALAAQPFKTLVPSHGPVVGDARGIEQTRRYL CEEECCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH RWLDGSFGAAAQRGSEMTEVLAQPVPAEFRNWAAFATEYPRNVVHLYPAYELKSLQAR HHHCCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCC >Mature Secondary Structure GAVAQADPTTLDYRLSARALAPDVYVVEGANADFSRANGCNIINTGFIVVDDGVIVINT CCCCCCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCCCCCEEECCEEEEECCEEEEEC GPSKRYGEQLRALVGRTTGKPVKQVLHLNLHPDYFLGNQAFADVPRLATSATIEGMRAEA CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH KSYEDNLYRLCGDWMKATEALLPDRTVAPGPLLAGNPRFELRELKGHTASDLVLVDRISG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCC VVFAGGLVFVDRVPTTPHARLPDWLASLDALAAQPFKTLVPSHGPVVGDARGIEQTRRYL CEEECCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH RWLDGSFGAAAQRGSEMTEVLAQPVPAEFRNWAAFATEYPRNVVHLYPAYELKSLQAR HHHCCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA