Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265664
Identifier: 124265664
GI number: 124265664
Start: 510865
End: 511665
Strand: Direct
Name: 124265664
Synonym: Mpe_A0471
Alternate gene names: NA
Gene position: 510865-511665 (Clockwise)
Preceding gene: 124265663
Following gene: 124265665
Centisome position: 12.63
GC content: 68.66
Gene sequence:
>801_bases ATGTTCCCATCAGATGCGAAGTTGCAGCGCCGGCACCTGGTGCTGGCGACCGCCGCGGCCTGCGTGCTGCCGGCCCGTGC GGCCACCGACGAGTACGGTGGTGACCCTTATCGCTCGGCGCAGTGGCCCGAGATGGTCAAGGAGTTCCTGGGTGCGAAGT CGCGGGTCGAGTTCGACCCGCGCGTGCAGGTCAAGGGGCCGACGATGGCGGAAAACCCGATGGTCGTGCCCATCACGGTC TCGGCGCCGGACTTGGCCGACATCCAGCAGATCGTCGTGCTGGTGGACCGCAATCCGATCCGCAAGGTGCTGGAGTTCGA ACCGCTGGACGGGACCCGGGCCGCCATTTCCTTCCGTTTCAAGCTGGAGCAGGCCAGCGCCGTGCGCGCCGCGGCGCGCA CCCGCGATGGCGTCTGGCATGTCGGTGGCACCTGGGTCGAATCGTCGGGGGGCGGCTGCACGGTGGCCGGCGTAACCCGG CAGGACGGCAGCTGGTCGCAGACGCTCGGCCAGGTGAGCGGACGCTTCTTCGGCGATGCCGTCGAGGCGCCGGGTGCGCG GCTGCGTGTGCGGGTGATGCATCCGATGGACACCGGCCTGGTGGGCGGCATTCCGGCGTTCTACCTGCGCCGCATGGCCG TCACCGACGGGGGGGGCGTGGAGTTGTTGCGCCTGTCGACCTACGAACCGATCAGCGAGAACCCCGTGTTCTCGTTCGAC TTCCAGGGCCGACCGCCGGGGCCGTTCCGTGTGACCGGGGTCGACAACAACGGCAACCGCATCGACGGGCAAATCATATG A
Upstream 100 bases:
>100_bases ATCCTGACCTTGATCAGCATCTGGCGGTCCTGACCTTCAGCGGCAGGCCGCCGGTCGGGATGGCCTGCAATTTGCCTTTG CATCGCTCCAGGAGGCAAAG
Downstream 100 bases:
>100_bases ATCACCCCCGTTGCGGCTGCGCCGCTCTCCCTCGAGGGGGCGACGCTGGCGGGCCGGCAGAGCCGAACCCGCGGCGTCTG CTGGCCTGGGGCAGGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfur Oxidation Protein SoxZ; Secreted Protein-Like Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MFPSDAKLQRRHLVLATAAACVLPARAATDEYGGDPYRSAQWPEMVKEFLGAKSRVEFDPRVQVKGPTMAENPMVVPITV SAPDLADIQQIVVLVDRNPIRKVLEFEPLDGTRAAISFRFKLEQASAVRAAARTRDGVWHVGGTWVESSGGGCTVAGVTR QDGSWSQTLGQVSGRFFGDAVEAPGARLRVRVMHPMDTGLVGGIPAFYLRRMAVTDGGGVELLRLSTYEPISENPVFSFD FQGRPPGPFRVTGVDNNGNRIDGQII
Sequences:
>Translated_266_residues MFPSDAKLQRRHLVLATAAACVLPARAATDEYGGDPYRSAQWPEMVKEFLGAKSRVEFDPRVQVKGPTMAENPMVVPITV SAPDLADIQQIVVLVDRNPIRKVLEFEPLDGTRAAISFRFKLEQASAVRAAARTRDGVWHVGGTWVESSGGGCTVAGVTR QDGSWSQTLGQVSGRFFGDAVEAPGARLRVRVMHPMDTGLVGGIPAFYLRRMAVTDGGGVELLRLSTYEPISENPVFSFD FQGRPPGPFRVTGVDNNGNRIDGQII >Mature_266_residues MFPSDAKLQRRHLVLATAAACVLPARAATDEYGGDPYRSAQWPEMVKEFLGAKSRVEFDPRVQVKGPTMAENPMVVPITV SAPDLADIQQIVVLVDRNPIRKVLEFEPLDGTRAAISFRFKLEQASAVRAAARTRDGVWHVGGTWVESSGGGCTVAGVTR QDGSWSQTLGQVSGRFFGDAVEAPGARLRVRVMHPMDTGLVGGIPAFYLRRMAVTDGGGVELLRLSTYEPISENPVFSFD FQGRPPGPFRVTGVDNNGNRIDGQII
Specific function: Unknown
COG id: COG5501
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28852; Mature: 28852
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPSDAKLQRRHLVLATAAACVLPARAATDEYGGDPYRSAQWPEMVKEFLGAKSRVEFDP CCCCCCCHHHHEEHEEHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC RVQVKGPTMAENPMVVPITVSAPDLADIQQIVVLVDRNPIRKVLEFEPLDGTRAAISFRF EEEECCCCCCCCCEEEEEEECCCCHHHHEEEEEEECCCHHHHHHCCCCCCCCEEEEEEEE KLEQASAVRAAARTRDGVWHVGGTWVESSGGGCTVAGVTRQDGSWSQTLGQVSGRFFGDA EECHHHHHHHHHHCCCCEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCH VEAPGARLRVRVMHPMDTGLVGGIPAFYLRRMAVTDGGGVELLRLSTYEPISENPVFSFD HCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCEEEEE FQGRPPGPFRVTGVDNNGNRIDGQII CCCCCCCCEEEEEECCCCCEECCEEC >Mature Secondary Structure MFPSDAKLQRRHLVLATAAACVLPARAATDEYGGDPYRSAQWPEMVKEFLGAKSRVEFDP CCCCCCCHHHHEEHEEHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC RVQVKGPTMAENPMVVPITVSAPDLADIQQIVVLVDRNPIRKVLEFEPLDGTRAAISFRF EEEECCCCCCCCCEEEEEEECCCCHHHHEEEEEEECCCHHHHHHCCCCCCCCEEEEEEEE KLEQASAVRAAARTRDGVWHVGGTWVESSGGGCTVAGVTRQDGSWSQTLGQVSGRFFGDA EECHHHHHHHHHHCCCCEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCH VEAPGARLRVRVMHPMDTGLVGGIPAFYLRRMAVTDGGGVELLRLSTYEPISENPVFSFD HCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCEEEEE FQGRPPGPFRVTGVDNNGNRIDGQII CCCCCCCCEEEEEECCCCCEECCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA