Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is gltI [H]
Identifier: 124265636
GI number: 124265636
Start: 482032
End: 482925
Strand: Direct
Name: gltI [H]
Synonym: Mpe_A0443
Alternate gene names: 124265636
Gene position: 482032-482925 (Clockwise)
Preceding gene: 124265635
Following gene: 124265637
Centisome position: 11.92
GC content: 63.87
Gene sequence:
>894_bases ATGAAGAAATCGCTCTTGATCCTCGTGACCGCGCTGGCCGCCACCGGCCTCGCCCAGGCCGAGGACACCCTGAAGAAGGT CAAGGACTCCGGCGCCATCACCCTCGGTGTGCGCGAGTCCTCCGGTGTCCTGTCGTACACGCTGGGTGGTGCCAAGTACG TCGGCTACCACGTGGCGATCTGCGAGAAGGCGGTCGAGGACATCGAGAAGGCGGTCGGCCGCAAGCTCAAGGTCAACTAC CAGCCGGTGACATCGCAGAACCGCATCCCGCTGGTGCAGAACGGCACCGTCGACCTCGAGTGCGGCTCGACCACCAACAA CGCCACCCGCCAGAAGGACGTGGCCTTCGCCAACACCACCTTCGTCGAGGAAGTGCGGATGGCGGTCAAGACCAGCTCGG GCATCAAGTCGATCGCCGACCTGCAGGGCAAGACGGTGGCCACGACCACCGGAACGACCTCGGTGCAGACGCTGCGCAAG AACAAGCGGGCCGAGAACATGGAGTTCAAGGAAGTGTTCGGCAAGGACCACTCCGACAGCTTCCTGCTGGTCGACAGTGG CCGCGCCGACGTGTTCGTGATGGACGGCAGCCTGCTGGCCGGGCTGATCGCGCGCAGCAAGAATCCGGCGGACTTCAAGA TCGTCGGCGAGGTGCTGTCGGTCGAGCCGATCGCCATCATGATGCGCAAGGACGACGAGGCGCTGCTGAAGCTGGTCAAC GCCACGATCGCCGGCATGGTGAAGTCGGGCGAAATCAACGCGCTCTACGACAAGTGGTTCATGCAGCCGACGCCGCCCAC CGGCGCGAAGGTCGGCCTGCCGATGAGCGACACCCTCAAGGACACGCTGAAGCACCCCAACAACAAGCCGATGGAAGACT ACGCGAAGAAGTGA
Upstream 100 bases:
>100_bases CGTTCCGGGGCGATGCACCTGTGGCGACCCCGTATGGCCTGCACGCCGAGCCTCCTGTAGATTTTTGCTCTTCCGTTACC GATCCCCACAAGGAGTCTTC
Downstream 100 bases:
>100_bases TCCAGGCAGACCGGGCCGGGGCAGCAGCATCGCCCCGGCTTGAGTCGGGCGCGCGATAAGGGTACAACCCAACCGCGCCG CTCCGTCGGGCGCAGAAAGC
Product: amino-acid ABC transporter binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKKSLLILVTALAATGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYHVAICEKAVEDIEKAVGRKLKVNY QPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVAFANTTFVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRK NKRAENMEFKEVFGKDHSDSFLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEALLKLVN ATIAGMVKSGEINALYDKWFMQPTPPTGAKVGLPMSDTLKDTLKHPNNKPMEDYAKK
Sequences:
>Translated_297_residues MKKSLLILVTALAATGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYHVAICEKAVEDIEKAVGRKLKVNY QPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVAFANTTFVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRK NKRAENMEFKEVFGKDHSDSFLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEALLKLVN ATIAGMVKSGEINALYDKWFMQPTPPTGAKVGLPMSDTLKDTLKHPNNKPMEDYAKK >Mature_297_residues MKKSLLILVTALAATGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYHVAICEKAVEDIEKAVGRKLKVNY QPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVAFANTTFVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRK NKRAENMEFKEVFGKDHSDSFLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEALLKLVN ATIAGMVKSGEINALYDKWFMQPTPPTGAKVGLPMSDTLKDTLKHPNNKPMEDYAKK
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=44.0740740740741, Blast_Score=222, Evalue=2e-59, Organism=Escherichia coli, GI1787031, Length=215, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788228, Length=255, Percent_Identity=25.8823529411765, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32044; Mature: 32044
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLLILVTALAATGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYHVAI CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHH CEKAVEDIEKAVGRKLKVNYQPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVAFANTT HHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCEEEEEECCCCCCCCHHHCCEEHHHH FVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRKNKRAENMEFKEVFGKDHSDS HHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCC FLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEALLKLVN EEEEECCCCEEEEECCHHHHHHHHCCCCCCCCEEEHHHHCCCEEEEEEECCHHHHHHHHH ATIAGMVKSGEINALYDKWFMQPTPPTGAKVGLPMSDTLKDTLKHPNNKPMEDYAKK HHHHHHCCCCCCEEEHHHHCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHCC >Mature Secondary Structure MKKSLLILVTALAATGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYHVAI CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHH CEKAVEDIEKAVGRKLKVNYQPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVAFANTT HHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCEEEEEECCCCCCCCHHHCCEEHHHH FVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRKNKRAENMEFKEVFGKDHSDS HHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCC FLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEALLKLVN EEEEECCCCEEEEECCHHHHHHHHCCCCCCCCEEEHHHHCCCEEEEEEECCHHHHHHHHH ATIAGMVKSGEINALYDKWFMQPTPPTGAKVGLPMSDTLKDTLKHPNNKPMEDYAKK HHHHHHCCCCCCEEEHHHHCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]