Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265582
Identifier: 124265582
GI number: 124265582
Start: 422488
End: 422976
Strand: Direct
Name: 124265582
Synonym: Mpe_A0389
Alternate gene names: NA
Gene position: 422488-422976 (Clockwise)
Preceding gene: 124265581
Following gene: 124265584
Centisome position: 10.45
GC content: 68.92
Gene sequence:
>489_bases ATGCTGCAACTCGCCAAGACGCTTTCTGCACCGGTTGCCGCCGCCCTGTTGGCCGGCTGCGCCTTTCATCAGGCGCCCTA CGTTGCGCACGAGCCCGGTCTCGCGCCCAGCGAAACCAGCGTGTTCTCGGTGATCACCGAGAACGCGGCCAGGAACGGCG CGCTGGAGATCACGCATGTGGACGGCAAGCCCACCGCCTGTGCCCAGGCGGGGTGTCCGGTGTGGGTGCGGGTCAAGCCC GGCACGCACGCGTTCGGCCTGCGGTTCAACGGCGACTACAAGCTCGCCGGTGCCTTCATCCGGTGGCAGACCGCGGTGCT GTCGGTCGAGGTGCCGGACATGCAGGCGCGGCACGTCTACCTCGGCCGGCAGGTGCTCTCGAACGACCGCGTGGCCGTGC AGCTGCAAGACCTGGGCGAGCGGCCCGACCATGGCCTCTCCCTGGGCCTGGAAGGCGCCAACCGGAAGTACCACCCGGTC ACCTTCTAG
Upstream 100 bases:
>100_bases GAACGGTTGCGTGCTGCCTTCGCCGCCCGGTAGCCGCCGCTGCGCGCGGCAACTTTGCAATCATCCCGGTCCGCTGCTTC CCCTTCTTCGTGCCGACACC
Downstream 100 bases:
>100_bases CCGTCGTCGGCTGGAGTCCATCGCCATGCCTGCCCCCAGCACCGAAGACACCGCGGCATTTGCGGCCGTGCTCGCCCGGC TCGACACCGCTCTCCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLQLAKTLSAPVAAALLAGCAFHQAPYVAHEPGLAPSETSVFSVITENAARNGALEITHVDGKPTACAQAGCPVWVRVKP GTHAFGLRFNGDYKLAGAFIRWQTAVLSVEVPDMQARHVYLGRQVLSNDRVAVQLQDLGERPDHGLSLGLEGANRKYHPV TF
Sequences:
>Translated_162_residues MLQLAKTLSAPVAAALLAGCAFHQAPYVAHEPGLAPSETSVFSVITENAARNGALEITHVDGKPTACAQAGCPVWVRVKP GTHAFGLRFNGDYKLAGAFIRWQTAVLSVEVPDMQARHVYLGRQVLSNDRVAVQLQDLGERPDHGLSLGLEGANRKYHPV TF >Mature_162_residues MLQLAKTLSAPVAAALLAGCAFHQAPYVAHEPGLAPSETSVFSVITENAARNGALEITHVDGKPTACAQAGCPVWVRVKP GTHAFGLRFNGDYKLAGAFIRWQTAVLSVEVPDMQARHVYLGRQVLSNDRVAVQLQDLGERPDHGLSLGLEGANRKYHPV TF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17367; Mature: 17367
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLAKTLSAPVAAALLAGCAFHQAPYVAHEPGLAPSETSVFSVITENAARNGALEITHV CCCCHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEE DGKPTACAQAGCPVWVRVKPGTHAFGLRFNGDYKLAGAFIRWQTAVLSVEVPDMQARHVY CCCCCCHHCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEEEEEEEEECCCCCCCEEE LGRQVLSNDRVAVQLQDLGERPDHGLSLGLEGANRKYHPVTF ECHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCEECCCCC >Mature Secondary Structure MLQLAKTLSAPVAAALLAGCAFHQAPYVAHEPGLAPSETSVFSVITENAARNGALEITHV CCCCHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEE DGKPTACAQAGCPVWVRVKPGTHAFGLRFNGDYKLAGAFIRWQTAVLSVEVPDMQARHVY CCCCCCHHCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEEEEEEEEECCCCCCCEEE LGRQVLSNDRVAVQLQDLGERPDHGLSLGLEGANRKYHPVTF ECHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA