Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265581
Identifier: 124265581
GI number: 124265581
Start: 421875
End: 422420
Strand: Direct
Name: 124265581
Synonym: Mpe_A0388
Alternate gene names: NA
Gene position: 421875-422420 (Clockwise)
Preceding gene: 124265580
Following gene: 124265582
Centisome position: 10.43
GC content: 71.25
Gene sequence:
>546_bases ATGCGCAAGCCCAGTTTCCTCGTCGTATTGCTGTTCGCCCTCGCCGCCGGCGCGCAGGCCGCTCCGCCCGGCGAGTTCGC CGGCGTGAACCCCAAGGATCTGCAGCCGTCCCCGGAGGCCGGAGCGGTGGACCTCGCCGAACGCCTGGTCTGGACCCGCA GCGCCAGGAACACCGAACTCGGCGTGCTGCCCGGCAAGTACACCGCCCATGGGCAGGACGCCCAGGGCCGGTACTTCCTG GCCACCAGCCCCGCCTTCGCCTTCTACATGCGCTCGGTCCGCGGCCAGTACCTGCTGGCCCGTGGCGGCGTTCTCCTGCC GCACGCGCCGACGGCGCGTGCCCGCTTCTTCTTCGTCCAGGACGATCGCGTGAAGACCGGCAAGACCCTCGAGGAGGCCA TGGCCCACACGCCGGACGAGCCTGCTGCGGTGCCCCTGCTCGACGCGCTGCTCAACTGGGCGAGCCAGGGGCACCTGGTG GCCCTGGCCGAGATCGACGACGACGCGCTGAACGAACGGTTGCGTGCTGCCTTCGCCGCCCGGTAG
Upstream 100 bases:
>100_bases AGAAGGTGGAGGTGGGGGCATGATGCCGAGCGCTCGGCGCGAGCGGAGCCGGGGCCTGTCGCGGTTTCGCCGACACTCCG ACCCGCCGAAGGAGTGACCG
Downstream 100 bases:
>100_bases CCGCCGCTGCGCGCGGCAACTTTGCAATCATCCCGGTCCGCTGCTTCCCCTTCTTCGTGCCGACACCATGCTGCAACTCG CCAAGACGCTTTCTGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRKPSFLVVLLFALAAGAQAAPPGEFAGVNPKDLQPSPEAGAVDLAERLVWTRSARNTELGVLPGKYTAHGQDAQGRYFL ATSPAFAFYMRSVRGQYLLARGGVLLPHAPTARARFFFVQDDRVKTGKTLEEAMAHTPDEPAAVPLLDALLNWASQGHLV ALAEIDDDALNERLRAAFAAR
Sequences:
>Translated_181_residues MRKPSFLVVLLFALAAGAQAAPPGEFAGVNPKDLQPSPEAGAVDLAERLVWTRSARNTELGVLPGKYTAHGQDAQGRYFL ATSPAFAFYMRSVRGQYLLARGGVLLPHAPTARARFFFVQDDRVKTGKTLEEAMAHTPDEPAAVPLLDALLNWASQGHLV ALAEIDDDALNERLRAAFAAR >Mature_181_residues MRKPSFLVVLLFALAAGAQAAPPGEFAGVNPKDLQPSPEAGAVDLAERLVWTRSARNTELGVLPGKYTAHGQDAQGRYFL ATSPAFAFYMRSVRGQYLLARGGVLLPHAPTARARFFFVQDDRVKTGKTLEEAMAHTPDEPAAVPLLDALLNWASQGHLV ALAEIDDDALNERLRAAFAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19537; Mature: 19537
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKPSFLVVLLFALAAGAQAAPPGEFAGVNPKDLQPSPEAGAVDLAERLVWTRSARNTEL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE GVLPGKYTAHGQDAQGRYFLATSPAFAFYMRSVRGQYLLARGGVLLPHAPTARARFFFVQ ECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCEEEECCCEECCCCCCCCEEEEEEE DDRVKTGKTLEEAMAHTPDEPAAVPLLDALLNWASQGHLVALAEIDDDALNERLRAAFAA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHC R C >Mature Secondary Structure MRKPSFLVVLLFALAAGAQAAPPGEFAGVNPKDLQPSPEAGAVDLAERLVWTRSARNTEL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE GVLPGKYTAHGQDAQGRYFLATSPAFAFYMRSVRGQYLLARGGVLLPHAPTARARFFFVQ ECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCEEEECCCEECCCCCCCCEEEEEEE DDRVKTGKTLEEAMAHTPDEPAAVPLLDALLNWASQGHLVALAEIDDDALNERLRAAFAA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA