Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265584
Identifier: 124265584
GI number: 124265584
Start: 423598
End: 424053
Strand: Direct
Name: 124265584
Synonym: Mpe_A0391
Alternate gene names: NA
Gene position: 423598-424053 (Clockwise)
Preceding gene: 124265582
Following gene: 124265585
Centisome position: 10.47
GC content: 67.54
Gene sequence:
>456_bases ATGCAGTCCCTGCTCAGCAGTTTGCTGGTTACGTTGGCGTTGGTGTTCGTCGCCGCGCCCGCCGCCGCCAACCCGCCGCT CACCCCGTCCGCCGTGGTGGGCCCGTGGAAGAAGCTGTCGCACACCGTCGTGCTCGACGGCCGGTCGATGGACTCGCACG CCGCGCTGCTGCAGCAGCGGCCGTGCGCGGCGCAGGTGGTCTACGAGATCCACGCCGACGGCCGCTATCGGCTCGACGCC AGCGGCAGCCACTGCGACGACAAGTACAAGCGCATGCAGGAGAAGCTCTACGCCAAGACGCAGTGGAAGCTCGAAGGCCA GAAGTTCACCACCTCGGCCACGAACTTCGCCGTCGGGCAGAGCTACAACGTCAGCGTTGCGGGGCAGCGCATGACCTGGG TCGGCACCGAAGGGCAGGGCACGCTGGTGTTCGAGAGGGTGAACCCGGCGAAGTAG
Upstream 100 bases:
>100_bases CAGGCTGAGCGGCCCGGCATTCGCGACGAGTTGGGGATGGCGGCCGGGTCGTCGGCGCGGTCCCATGCAGCCCTGACGGC ACATTCCCGGGAGTCCACGC
Downstream 100 bases:
>100_bases CGGCCGTCGCGCGCCGGGCCTCAGGCTGTAAGCCCCGGCCCCCTCGCCGCGACTGAACCGCCATGAAACGCACCGTGCTC CTGGTCTCCCATCTCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MQSLLSSLLVTLALVFVAAPAAANPPLTPSAVVGPWKKLSHTVVLDGRSMDSHAALLQQRPCAAQVVYEIHADGRYRLDA SGSHCDDKYKRMQEKLYAKTQWKLEGQKFTTSATNFAVGQSYNVSVAGQRMTWVGTEGQGTLVFERVNPAK
Sequences:
>Translated_151_residues MQSLLSSLLVTLALVFVAAPAAANPPLTPSAVVGPWKKLSHTVVLDGRSMDSHAALLQQRPCAAQVVYEIHADGRYRLDA SGSHCDDKYKRMQEKLYAKTQWKLEGQKFTTSATNFAVGQSYNVSVAGQRMTWVGTEGQGTLVFERVNPAK >Mature_151_residues MQSLLSSLLVTLALVFVAAPAAANPPLTPSAVVGPWKKLSHTVVLDGRSMDSHAALLQQRPCAAQVVYEIHADGRYRLDA SGSHCDDKYKRMQEKLYAKTQWKLEGQKFTTSATNFAVGQSYNVSVAGQRMTWVGTEGQGTLVFERVNPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16465; Mature: 16465
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLLSSLLVTLALVFVAAPAAANPPLTPSAVVGPWKKLSHTVVLDGRSMDSHAALLQQR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCCCHHHHHHHCC PCAAQVVYEIHADGRYRLDASGSHCDDKYKRMQEKLYAKTQWKLEGQKFTTSATNFAVGQ CCHHEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCEEECCCCCEECCC SYNVSVAGQRMTWVGTEGQGTLVFERVNPAK CCCEEECCCEEEEEECCCCCEEEEECCCCCC >Mature Secondary Structure MQSLLSSLLVTLALVFVAAPAAANPPLTPSAVVGPWKKLSHTVVLDGRSMDSHAALLQQR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCCCHHHHHHHCC PCAAQVVYEIHADGRYRLDASGSHCDDKYKRMQEKLYAKTQWKLEGQKFTTSATNFAVGQ CCHHEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCEEECCCCCEECCC SYNVSVAGQRMTWVGTEGQGTLVFERVNPAK CCCEEECCCEEEEEECCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA