Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is yvgK [H]
Identifier: 124265532
GI number: 124265532
Start: 372196
End: 373272
Strand: Direct
Name: yvgK [H]
Synonym: Mpe_A0339
Alternate gene names: 124265532
Gene position: 372196-373272 (Clockwise)
Preceding gene: 124265527
Following gene: 124265534
Centisome position: 9.2
GC content: 71.22
Gene sequence:
>1077_bases ATGCGGATCCAGATCACCCCTCACTGGGGCGTCGCCCAGGACGTCGACCACCTCGTCGACACCACCGCGCTGCTGACCCT GCTGGCCGCGATCCAGGAGACCGGCGCGATCGCGCAGGCGGCTCGCAGCGTCGGCCTGTCCTACCGCCACGCCTGGGGGC AGGTGAAGCGTGCCGAGGACCTGTTCGGCTACCCGCTGGTCAACGCCGGCCGCGGCCGCGGCTCCACGCTGACGCCGCTG GCCGAGAAGCTGATCTGGGCCGATCGCCGCATTGCCGCGCGGCTGTCACCGCTGCTGTCGTCGCTGGCGTCGGAGCTGGA GAACGAGCTCGGCCGCACGCTGCCGCAACGCACCGATGGCTCCGCGGCGCTGCGCCTGCACGCCAGCCATGGCTTTGCGG TGGCGGCGCTGGTGGAGAAGCTCGAGGCCGCGTCGCTGTCGGTCGAGCTGCGCTACCGCAACAGCTTCGAGTCGGTGTCG GCGTTGGCGCGCGGCGAGTGCGACCTGGCCGGCTTCCACGTGCCGATCGGCGAGTTCGAGGCGCCGGCGGTCAAGCGCTA CATGAAGTGGCTCAAGCCGCAGACCCACAGCCTGGTGCACCTGGCGGTGCGTACCCAGGGCCTGTTCGTCGCACCGGGCA ACCCCAAGCGCATCCGCACGCTGGCCGACTTGCAGCGCCCCGGCGTGCGCTTCGTCAACCGGCCCGAGGGTTCGGGCACG CGCATGCTCACCGAGTTGCTGCTGAACCAGGCGGGCGTGGTGCCGGCCGAGATCAGCGGCTACGAGAGCACCGAATTCAC GCATGCGGCAGTGGCCGCCTACATCGCCAGCGGCATGGCCGACGTCGGCATCGGCGTGCAGACCGCGGCGCAGCGCTTCG GCCTGCCGTTCATCCCGCTGGTGCGCGAGCGCTATTTCTTCGCGCTGCCGACCGCGTCGCTGAACCGGCCGGCCATGCGC ACCGTGCTGGACCTGATGCAGTCGCCGGTCTACCGCTCGTCGGTGTCGTCGCTGGTCGGCTACGAGGCCGGCGAGACCGG CCGGGTGCTGAGCGTGACCGAGGCGTTCGACCGCTAG
Upstream 100 bases:
>100_bases GCCGTTCGCTTATGTTTCAATGAGCATATGCCCGGGCGCTGTCTCGTCCCGGGACGATAGCGGGCCCCCCTCACTCTGAT ATGCACAAGGCCGCCTAATC
Downstream 100 bases:
>100_bases GGTCAGGCGTCTTTGCTGCGCCGCTCGCGCAGGCGCCGGTAGATGAGGCCGCGCGACACGCCGAGCTGGCGCGCGGCGCG CGACACGTTGCCGCCGCATT
Product: molybdate metabolism transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MRIQITPHWGVAQDVDHLVDTTALLTLLAAIQETGAIAQAARSVGLSYRHAWGQVKRAEDLFGYPLVNAGRGRGSTLTPL AEKLIWADRRIAARLSPLLSSLASELENELGRTLPQRTDGSAALRLHASHGFAVAALVEKLEAASLSVELRYRNSFESVS ALARGECDLAGFHVPIGEFEAPAVKRYMKWLKPQTHSLVHLAVRTQGLFVAPGNPKRIRTLADLQRPGVRFVNRPEGSGT RMLTELLLNQAGVVPAEISGYESTEFTHAAVAAYIASGMADVGIGVQTAAQRFGLPFIPLVRERYFFALPTASLNRPAMR TVLDLMQSPVYRSSVSSLVGYEAGETGRVLSVTEAFDR
Sequences:
>Translated_358_residues MRIQITPHWGVAQDVDHLVDTTALLTLLAAIQETGAIAQAARSVGLSYRHAWGQVKRAEDLFGYPLVNAGRGRGSTLTPL AEKLIWADRRIAARLSPLLSSLASELENELGRTLPQRTDGSAALRLHASHGFAVAALVEKLEAASLSVELRYRNSFESVS ALARGECDLAGFHVPIGEFEAPAVKRYMKWLKPQTHSLVHLAVRTQGLFVAPGNPKRIRTLADLQRPGVRFVNRPEGSGT RMLTELLLNQAGVVPAEISGYESTEFTHAAVAAYIASGMADVGIGVQTAAQRFGLPFIPLVRERYFFALPTASLNRPAMR TVLDLMQSPVYRSSVSSLVGYEAGETGRVLSVTEAFDR >Mature_358_residues MRIQITPHWGVAQDVDHLVDTTALLTLLAAIQETGAIAQAARSVGLSYRHAWGQVKRAEDLFGYPLVNAGRGRGSTLTPL AEKLIWADRRIAARLSPLLSSLASELENELGRTLPQRTDGSAALRLHASHGFAVAALVEKLEAASLSVELRYRNSFESVS ALARGECDLAGFHVPIGEFEAPAVKRYMKWLKPQTHSLVHLAVRTQGLFVAPGNPKRIRTLADLQRPGVRFVNRPEGSGT RMLTELLLNQAGVVPAEISGYESTEFTHAAVAAYIASGMADVGIGVQTAAQRFGLPFIPLVRERYFFALPTASLNRPAMR TVLDLMQSPVYRSSVSSLVGYEAGETGRVLSVTEAFDR
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38865; Mature: 38865
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQITPHWGVAQDVDHLVDTTALLTLLAAIQETGAIAQAARSVGLSYRHAWGQVKRAED CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LFGYPLVNAGRGRGSTLTPLAEKLIWADRRIAARLSPLLSSLASELENELGRTLPQRTDG HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SAALRLHASHGFAVAALVEKLEAASLSVELRYRNSFESVSALARGECDLAGFHVPIGEFE CEEEEEECCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCC APAVKRYMKWLKPQTHSLVHLAVRTQGLFVAPGNPKRIRTLADLQRPGVRFVNRPEGSGT CHHHHHHHHHHCCCHHHHEEEEEECCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHH RMLTELLLNQAGVVPAEISGYESTEFTHAAVAAYIASGMADVGIGVQTAAQRFGLPFIPL HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHCCCCCHHH VRERYFFALPTASLNRPAMRTVLDLMQSPVYRSSVSSLVGYEAGETGRVLSVTEAFDR HHHCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHCC >Mature Secondary Structure MRIQITPHWGVAQDVDHLVDTTALLTLLAAIQETGAIAQAARSVGLSYRHAWGQVKRAED CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LFGYPLVNAGRGRGSTLTPLAEKLIWADRRIAARLSPLLSSLASELENELGRTLPQRTDG HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SAALRLHASHGFAVAALVEKLEAASLSVELRYRNSFESVSALARGECDLAGFHVPIGEFE CEEEEEECCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCC APAVKRYMKWLKPQTHSLVHLAVRTQGLFVAPGNPKRIRTLADLQRPGVRFVNRPEGSGT CHHHHHHHHHHCCCHHHHEEEEEECCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHH RMLTELLLNQAGVVPAEISGYESTEFTHAAVAAYIASGMADVGIGVQTAAQRFGLPFIPL HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHCCCCCHHH VRERYFFALPTASLNRPAMRTVLDLMQSPVYRSSVSSLVGYEAGETGRVLSVTEAFDR HHHCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]