Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is smtA [C]
Identifier: 124265521
GI number: 124265521
Start: 358965
End: 360020
Strand: Direct
Name: smtA [C]
Synonym: Mpe_A0328
Alternate gene names: 124265521
Gene position: 358965-360020 (Clockwise)
Preceding gene: 124265520
Following gene: 124265527
Centisome position: 8.88
GC content: 67.9
Gene sequence:
>1056_bases ATGGCTATCGACATGGACAAGCTCAATGCCTTCATGGGTCGCTTCGTGGTCGACATCGGCGCCGCCCTGCATGCCGGTAC GGTGGTGCTCGGCGACCAGCTCGGTCTGTACAAGGCGCTGGCCGACGGGCCGATGAGCCCGGCCGACCTGGCGAGCCGAA CCCAGACCGACGAGCGCTATGTGCGCGAATGGCTGAGCGCTCAGGCGGCGGCCGGCTATGTCGAATACGACGCCGACACC CGGCAGTTCCACATGACCGAAGAGCAGGTGTTCGCGCTGGCCACCGAGGGCAGCCCGGCCTTCGTGCCGGGGGCTTTCCA GGTGGCGCTTGGTGCACTGAAGGCCGTGCCCAAGCTGGCTGGCGTGTTCCGCACCGGACTGGGCTTCGGCTGGCACCAGC ACGACCCGTTGCTGTTCCAGGGCACCGAGCGCTTCTTTAGGCCGGGCTATGCGGCCAACCTCGTAACGAACTGGATCCCC GCCCTCGATGGGGTGGAGTCTTGCCTCAAGTCCGGCGCACGGGTGGCTGATGTGGGTTGCGGCCACGGCGCCTCCACGAT CCTGATGGCAGAAGCCTATCCGGAGAGCCGCTTCGTCGGCTTCGATTACCACGCGCCGTCGATCGACTGGGCGCGACAGG TGGCGGCCGAGGCGGGGGTCGCCGACCGGGTGAGCTTCGAGGTGGCCTCGGCCAAGGACTTCCCCGGTGGCGACTACGAT CTCGTGGCCTTCTTCGATTGCCTGCACGACATGGGTGATCCGGTTGGCGCCTCGCGTCACGTCAGGGCGGCGCTGAAGCC CGGCGGCTGCTGGATGATCGTGGAGCCGTTCGCCCACGATGCGCTGCAGGACAACCTCAACCCGGTCGGCCGCATCTTCT ATTCGGCCTCGACGATGATCTGCACGCCCGCCTCGCGTTCACAGGAGGTGGGGCTGGCGCTCGGCGCTCAGGCCGGCGAG CGACGCCTGCGCACGGTCGTCAACGACGGCGGCTTCCGGCAGTTCCGGCGCGCGACCGAAACGCCGTTCAACCTGGTGTT CGAGGCGCGGCCCTAG
Upstream 100 bases:
>100_bases GGATCTGGAATCCAGTCGCTACGATGAGGAAGGCGATGCCTCTTTCGTGCGCCCCGGGAGCCTCCCGGACACTGCCACTT TCCAGACCAAGGAGTCCGTC
Downstream 100 bases:
>100_bases CCGCCAGGGTCGACGGCGTGCCTCAGTCGAGCCGACCGCGCGCATCGATCGGCCACACCGCCTCGACAACCCCCCGGTCG AGGCCACCGCGCACGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Transcriptional Regulator; Transcriptional Regulatory Protein; SAM-Dependent Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Protein; Methyltransferase Domain Family
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MAIDMDKLNAFMGRFVVDIGAALHAGTVVLGDQLGLYKALADGPMSPADLASRTQTDERYVREWLSAQAAAGYVEYDADT RQFHMTEEQVFALATEGSPAFVPGAFQVALGALKAVPKLAGVFRTGLGFGWHQHDPLLFQGTERFFRPGYAANLVTNWIP ALDGVESCLKSGARVADVGCGHGASTILMAEAYPESRFVGFDYHAPSIDWARQVAAEAGVADRVSFEVASAKDFPGGDYD LVAFFDCLHDMGDPVGASRHVRAALKPGGCWMIVEPFAHDALQDNLNPVGRIFYSASTMICTPASRSQEVGLALGAQAGE RRLRTVVNDGGFRQFRRATETPFNLVFEARP
Sequences:
>Translated_351_residues MAIDMDKLNAFMGRFVVDIGAALHAGTVVLGDQLGLYKALADGPMSPADLASRTQTDERYVREWLSAQAAAGYVEYDADT RQFHMTEEQVFALATEGSPAFVPGAFQVALGALKAVPKLAGVFRTGLGFGWHQHDPLLFQGTERFFRPGYAANLVTNWIP ALDGVESCLKSGARVADVGCGHGASTILMAEAYPESRFVGFDYHAPSIDWARQVAAEAGVADRVSFEVASAKDFPGGDYD LVAFFDCLHDMGDPVGASRHVRAALKPGGCWMIVEPFAHDALQDNLNPVGRIFYSASTMICTPASRSQEVGLALGAQAGE RRLRTVVNDGGFRQFRRATETPFNLVFEARP >Mature_350_residues AIDMDKLNAFMGRFVVDIGAALHAGTVVLGDQLGLYKALADGPMSPADLASRTQTDERYVREWLSAQAAAGYVEYDADTR QFHMTEEQVFALATEGSPAFVPGAFQVALGALKAVPKLAGVFRTGLGFGWHQHDPLLFQGTERFFRPGYAANLVTNWIPA LDGVESCLKSGARVADVGCGHGASTILMAEAYPESRFVGFDYHAPSIDWARQVAAEAGVADRVSFEVASAKDFPGGDYDL VAFFDCLHDMGDPVGASRHVRAALKPGGCWMIVEPFAHDALQDNLNPVGRIFYSASTMICTPASRSQEVGLALGAQAGER RLRTVVNDGGFRQFRRATETPFNLVFEARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17562972, Length=341, Percent_Identity=27.8592375366569, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17562552, Length=364, Percent_Identity=26.3736263736264, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17562982, Length=329, Percent_Identity=26.7477203647416, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193208453, Length=223, Percent_Identity=28.6995515695067, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37873; Mature: 37742
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDMDKLNAFMGRFVVDIGAALHAGTVVLGDQLGLYKALADGPMSPADLASRTQTDERY CCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCHHHHHHHCCHHHHH VREWLSAQAAAGYVEYDADTRQFHMTEEQVFALATEGSPAFVPGAFQVALGALKAVPKLA HHHHHHHHHHCCEEEECCCCCEEECCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH GVFRTGLGFGWHQHDPLLFQGTERFFRPGYAANLVTNWIPALDGVESCLKSGARVADVGC HHHHHHCCCCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC GHGASTILMAEAYPESRFVGFDYHAPSIDWARQVAAEAGVADRVSFEVASAKDFPGGDYD CCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCHH LVAFFDCLHDMGDPVGASRHVRAALKPGGCWMIVEPFAHDALQDNLNPVGRIFYSASTMI HHHHHHHHHHCCCCCCCCHHHHEEECCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCEEE CTPASRSQEVGLALGAQAGERRLRTVVNDGGFRQFRRATETPFNLVFEARP ECCCCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure AIDMDKLNAFMGRFVVDIGAALHAGTVVLGDQLGLYKALADGPMSPADLASRTQTDERY CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCHHHHHHHCCHHHHH VREWLSAQAAAGYVEYDADTRQFHMTEEQVFALATEGSPAFVPGAFQVALGALKAVPKLA HHHHHHHHHHCCEEEECCCCCEEECCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH GVFRTGLGFGWHQHDPLLFQGTERFFRPGYAANLVTNWIPALDGVESCLKSGARVADVGC HHHHHHCCCCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC GHGASTILMAEAYPESRFVGFDYHAPSIDWARQVAAEAGVADRVSFEVASAKDFPGGDYD CCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCHH LVAFFDCLHDMGDPVGASRHVRAALKPGGCWMIVEPFAHDALQDNLNPVGRIFYSASTMI HHHHHHHHHHCCCCCCCCHHHHEEECCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCEEE CTPASRSQEVGLALGAQAGERRLRTVVNDGGFRQFRRATETPFNLVFEARP ECCCCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA