Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is yajC [H]
Identifier: 124265469
GI number: 124265469
Start: 300025
End: 300351
Strand: Direct
Name: yajC [H]
Synonym: Mpe_A0276
Alternate gene names: 124265469
Gene position: 300025-300351 (Clockwise)
Preceding gene: 124265468
Following gene: 124265470
Centisome position: 7.42
GC content: 64.83
Gene sequence:
>327_bases GTGTTCATTTCCGAAGCTTTTGCCCAGGCCGCTCCGGCCGCCGCCGCCGGTGGGGAGTCGAGCCTGCTCACGATGCTGCC GCTCGTGCTGATGTTCGTGGTGCTGTATTTCGTGATGATCCGCCCGCAGATGAAGCGCCAGAAGGAGCACAAGGCGATGG TCGATGCGCTGGCCAAGGGCGACGAGGTCGTCACCGCCGGTGGCGTGCTCGGCAAGGTGGCGAAGATCGGTGACACCTAC CTGCATGTCGAGGTCGCCAGCGGCGTGGAACTGCAGGTGCAGCGTTCCGCCGTGGTGCAGGTGCTGCCCAAGGGCACGCT GAAGTAA
Upstream 100 bases:
>100_bases CCATCGAACCTTCTGCGCGGCGCCTGCTCCAACCGGCCCGGGAGGGAGCGCGCACTACAATGCGCGCTGTCGCTGGTGCA ACCAATTCAAGGACGAGACA
Downstream 100 bases:
>100_bases GCGCAGGCGATCGTGCCGCCTGTGCGGCGCGAGGCCCGAAGGCCGCGGTCACCGCTGGGTGTCGCGGCCTTTCGTGCAAA CAAGGGCGCCGTGTGGCACG
Product: protein translocase subunit yajC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MFISEAFAQAAPAAAAGGESSLLTMLPLVLMFVVLYFVMIRPQMKRQKEHKAMVDALAKGDEVVTAGGVLGKVAKIGDTY LHVEVASGVELQVQRSAVVQVLPKGTLK
Sequences:
>Translated_108_residues MFISEAFAQAAPAAAAGGESSLLTMLPLVLMFVVLYFVMIRPQMKRQKEHKAMVDALAKGDEVVTAGGVLGKVAKIGDTY LHVEVASGVELQVQRSAVVQVLPKGTLK >Mature_108_residues MFISEAFAQAAPAAAAGGESSLLTMLPLVLMFVVLYFVMIRPQMKRQKEHKAMVDALAKGDEVVTAGGVLGKVAKIGDTY LHVEVASGVELQVQRSAVVQVLPKGTLK
Specific function: Not known; elicits an immunogenic response in mice [H]
COG id: COG1862
COG function: function code U; Preprotein translocase subunit YajC
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0092 family [H]
Homologues:
Organism=Escherichia coli, GI1786608, Length=108, Percent_Identity=45.3703703703704, Blast_Score=92, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003849 [H]
Pfam domain/function: PF02699 YajC [H]
EC number: NA
Molecular weight: Translated: 11469; Mature: 11469
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFISEAFAQAAPAAAAGGESSLLTMLPLVLMFVVLYFVMIRPQMKRQKEHKAMVDALAKG CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC DEVVTAGGVLGKVAKIGDTYLHVEVASGVELQVQRSAVVQVLPKGTLK CCEEECCHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCC >Mature Secondary Structure MFISEAFAQAAPAAAAGGESSLLTMLPLVLMFVVLYFVMIRPQMKRQKEHKAMVDALAKG CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC DEVVTAGGVLGKVAKIGDTYLHVEVASGVELQVQRSAVVQVLPKGTLK CCEEECCHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9826342 [H]