Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265464

Identifier: 124265464

GI number: 124265464

Start: 293909

End: 294550

Strand: Direct

Name: 124265464

Synonym: Mpe_A0271

Alternate gene names: NA

Gene position: 293909-294550 (Clockwise)

Preceding gene: 124265463

Following gene: 124265465

Centisome position: 7.27

GC content: 72.12

Gene sequence:

>642_bases
ATGAGCACGACGCGCACCGTCCTCCTGGCGCTGCTGGCCCTGCTGCTGTTCTGGGGCGTCGGGGCCTACAACCGGCTGGT
GCGCCTGCGCAGCGCGGTCGGTGCGAGCTGGGTGCCGATCGACGCCCAACTGCGTCGCCGCCAGGCGCTGGCCTTCGAGC
TCACCGAGTTGCTGGCCAGCGACGAGGCGCGGCCGGCGATGGGCGACGCGGTGGGCGTCGCGATGCTGCAGACCGTGATG
GCCGCGACCCGGCAGGCCCAGGCCGCGGCCGACCACGCCCAGGGGCGGCCCACCAGTGCCGGCGCGATCCAGAGCCTCGG
ACTCGCCGAGCAGGTGCTCGAAGGGGCGCTGCGGCCGTTGCGCGTGCTGGTCGAGACGCGCGTCGATCGCTTCGACACGC
AGGCGACGCTGGAGCGCGTGGTCACGCTGTTGAGCGACCTGCAGGAAACCGACGCCCAGATCGCCTTCACGCGGCGTGTC
TTCAAGGATGCGGTTTCCGACTTCAATGCGGCGGTCCATGAGCTGCCCACGCGGCTGATCGCCAGCCTGTTCGGCTTCCG
GCCAGCTGCCGCCCTCCAGGCCGCCACACCGGACCGCGGGCCGGACTCCCAGATCGCCTCGTCGTTCGGTGACCGTGCCT
GA

Upstream 100 bases:

>100_bases
GGCTACGAGGCCTGGTGCGCCGGCGCCTGACGACGCACGCCGCGGCGGCCGCGACGGCTGGCGTAGAGTCGGCAGCCATG
CCGGCCCCCGCCCGTTCCCG

Downstream 100 bases:

>100_bases
GCGCCGCTGAGCCGGCCGGGCCTGGCGCAGCCGGCGGCCGCCTACACTGCGCGGCCGTGAGCGCTCCTGTACCGCCGTCC
CTCCCGCTGGCCACCCTGCT

Product: LemA protein

Products: NA

Alternate protein names: LemA Protein; LemA-Like Protein

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSTTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLASDEARPAMGDAVGVAMLQTVM
AATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPLRVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRV
FKDAVSDFNAAVHELPTRLIASLFGFRPAAALQAATPDRGPDSQIASSFGDRA

Sequences:

>Translated_213_residues
MSTTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLASDEARPAMGDAVGVAMLQTVM
AATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPLRVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRV
FKDAVSDFNAAVHELPTRLIASLFGFRPAAALQAATPDRGPDSQIASSFGDRA
>Mature_212_residues
STTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLASDEARPAMGDAVGVAMLQTVMA
ATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPLRVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRVF
KDAVSDFNAAVHELPTRLIASLFGFRPAAALQAATPDRGPDSQIASSFGDRA

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22894; Mature: 22763

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLAS
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
DEARPAMGDAVGVAMLQTVMAATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRVFKDAVSDFNAAVHELPTRLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLFGFRPAAALQAATPDRGPDSQIASSFGDRA
HHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
STTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLAS
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
DEARPAMGDAVGVAMLQTVMAATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRVFKDAVSDFNAAVHELPTRLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLFGFRPAAALQAATPDRGPDSQIASSFGDRA
HHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA