Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265464
Identifier: 124265464
GI number: 124265464
Start: 293909
End: 294550
Strand: Direct
Name: 124265464
Synonym: Mpe_A0271
Alternate gene names: NA
Gene position: 293909-294550 (Clockwise)
Preceding gene: 124265463
Following gene: 124265465
Centisome position: 7.27
GC content: 72.12
Gene sequence:
>642_bases ATGAGCACGACGCGCACCGTCCTCCTGGCGCTGCTGGCCCTGCTGCTGTTCTGGGGCGTCGGGGCCTACAACCGGCTGGT GCGCCTGCGCAGCGCGGTCGGTGCGAGCTGGGTGCCGATCGACGCCCAACTGCGTCGCCGCCAGGCGCTGGCCTTCGAGC TCACCGAGTTGCTGGCCAGCGACGAGGCGCGGCCGGCGATGGGCGACGCGGTGGGCGTCGCGATGCTGCAGACCGTGATG GCCGCGACCCGGCAGGCCCAGGCCGCGGCCGACCACGCCCAGGGGCGGCCCACCAGTGCCGGCGCGATCCAGAGCCTCGG ACTCGCCGAGCAGGTGCTCGAAGGGGCGCTGCGGCCGTTGCGCGTGCTGGTCGAGACGCGCGTCGATCGCTTCGACACGC AGGCGACGCTGGAGCGCGTGGTCACGCTGTTGAGCGACCTGCAGGAAACCGACGCCCAGATCGCCTTCACGCGGCGTGTC TTCAAGGATGCGGTTTCCGACTTCAATGCGGCGGTCCATGAGCTGCCCACGCGGCTGATCGCCAGCCTGTTCGGCTTCCG GCCAGCTGCCGCCCTCCAGGCCGCCACACCGGACCGCGGGCCGGACTCCCAGATCGCCTCGTCGTTCGGTGACCGTGCCT GA
Upstream 100 bases:
>100_bases GGCTACGAGGCCTGGTGCGCCGGCGCCTGACGACGCACGCCGCGGCGGCCGCGACGGCTGGCGTAGAGTCGGCAGCCATG CCGGCCCCCGCCCGTTCCCG
Downstream 100 bases:
>100_bases GCGCCGCTGAGCCGGCCGGGCCTGGCGCAGCCGGCGGCCGCCTACACTGCGCGGCCGTGAGCGCTCCTGTACCGCCGTCC CTCCCGCTGGCCACCCTGCT
Product: LemA protein
Products: NA
Alternate protein names: LemA Protein; LemA-Like Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSTTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLASDEARPAMGDAVGVAMLQTVM AATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPLRVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRV FKDAVSDFNAAVHELPTRLIASLFGFRPAAALQAATPDRGPDSQIASSFGDRA
Sequences:
>Translated_213_residues MSTTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLASDEARPAMGDAVGVAMLQTVM AATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPLRVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRV FKDAVSDFNAAVHELPTRLIASLFGFRPAAALQAATPDRGPDSQIASSFGDRA >Mature_212_residues STTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLASDEARPAMGDAVGVAMLQTVMA ATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPLRVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRVF KDAVSDFNAAVHELPTRLIASLFGFRPAAALQAATPDRGPDSQIASSFGDRA
Specific function: Unknown
COG id: COG1704
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22894; Mature: 22763
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLAS CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC DEARPAMGDAVGVAMLQTVMAATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRVFKDAVSDFNAAVHELPTRLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLFGFRPAAALQAATPDRGPDSQIASSFGDRA HHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure STTRTVLLALLALLLFWGVGAYNRLVRLRSAVGASWVPIDAQLRRRQALAFELTELLAS CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC DEARPAMGDAVGVAMLQTVMAATRQAQAAADHAQGRPTSAGAIQSLGLAEQVLEGALRPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RVLVETRVDRFDTQATLERVVTLLSDLQETDAQIAFTRRVFKDAVSDFNAAVHELPTRLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLFGFRPAAALQAATPDRGPDSQIASSFGDRA HHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA