Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265459
Identifier: 124265459
GI number: 124265459
Start: 289612
End: 290169
Strand: Direct
Name: 124265459
Synonym: Mpe_A0266
Alternate gene names: NA
Gene position: 289612-290169 (Clockwise)
Preceding gene: 124265458
Following gene: 124265461
Centisome position: 7.16
GC content: 58.6
Gene sequence:
>558_bases GTGAAGTCAACAGCTTGTACGACGCCGATGCTTTATGGGGGCGCAATGAAGGCGCTTAGTCTGGTCGCGACGTTGCTTGT GGCTGGATGCGGCGGCGGCGGTGATGACCAACCATTGCGTACCACGATCTCATTTCGAGGCGCTACCGGCGATTACATCT CCCAGGGCCAGTCGGCTAAGTTCAGCGATGTCGACAGCACGGTTTCGACCACCTACTCGGCGGGGTACTTCCGGGCTTCC TTCATCGCTCCTGACCTTTCGCACTCGTGGTCGATTGATCTGGCTTCCCCGAATGGCGAGCCCTTGGTTCCAGGGACGTA TGTCGACGCTTGGCGTGCCGCTTTTCGCAATGGTCACAACGGTGTGGATTTCTATGGCGATGGCCGCGGCTGCAATGAGG TGTTCGGTTCGTTCATCGTTCTGGAGGTCGGCTATGACTCCACCGGTCGGTTGAACCGCTTCGCCGCGGACTTTGATCAA CGCTGCGAAACGGTGACCTCACCACAGCTGCGCGGATCCGTTCGTATCAACAGCACGATCTCGCCGACCTACCAATGA
Upstream 100 bases:
>100_bases TGGCCTGGGACGCCAAGGAAGGCAAGGTCGGCTTCGAGTTCGAGCCGAGGGCGGCCAAGGTGCCGGCCAAGAAGTCCGGG GTTCGCGCCGGCACCAAATC
Downstream 100 bases:
>100_bases GTCGGCTCATACCAACTCGCGTTCAACCCTATCAACTCGCATGGGTGCTTCGGCTCGGTGCACTCGATAGGATGCGACAG TTCGAAGCGTCCTCCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKSTACTTPMLYGGAMKALSLVATLLVAGCGGGGDDQPLRTTISFRGATGDYISQGQSAKFSDVDSTVSTTYSAGYFRAS FIAPDLSHSWSIDLASPNGEPLVPGTYVDAWRAAFRNGHNGVDFYGDGRGCNEVFGSFIVLEVGYDSTGRLNRFAADFDQ RCETVTSPQLRGSVRINSTISPTYQ
Sequences:
>Translated_185_residues MKSTACTTPMLYGGAMKALSLVATLLVAGCGGGGDDQPLRTTISFRGATGDYISQGQSAKFSDVDSTVSTTYSAGYFRAS FIAPDLSHSWSIDLASPNGEPLVPGTYVDAWRAAFRNGHNGVDFYGDGRGCNEVFGSFIVLEVGYDSTGRLNRFAADFDQ RCETVTSPQLRGSVRINSTISPTYQ >Mature_185_residues MKSTACTTPMLYGGAMKALSLVATLLVAGCGGGGDDQPLRTTISFRGATGDYISQGQSAKFSDVDSTVSTTYSAGYFRAS FIAPDLSHSWSIDLASPNGEPLVPGTYVDAWRAAFRNGHNGVDFYGDGRGCNEVFGSFIVLEVGYDSTGRLNRFAADFDQ RCETVTSPQLRGSVRINSTISPTYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19685; Mature: 19685
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTACTTPMLYGGAMKALSLVATLLVAGCGGGGDDQPLRTTISFRGATGDYISQGQSAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCC FSDVDSTVSTTYSAGYFRASFIAPDLSHSWSIDLASPNGEPLVPGTYVDAWRAAFRNGHN CCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC GVDFYGDGRGCNEVFGSFIVLEVGYDSTGRLNRFAADFDQRCETVTSPQLRGSVRINSTI CCCEEECCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCC SPTYQ CCCCC >Mature Secondary Structure MKSTACTTPMLYGGAMKALSLVATLLVAGCGGGGDDQPLRTTISFRGATGDYISQGQSAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCC FSDVDSTVSTTYSAGYFRASFIAPDLSHSWSIDLASPNGEPLVPGTYVDAWRAAFRNGHN CCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC GVDFYGDGRGCNEVFGSFIVLEVGYDSTGRLNRFAADFDQRCETVTSPQLRGSVRINSTI CCCEEECCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCC SPTYQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA