Click here to switch to the map view.

The map label for this gene is yfdV [C]

Identifier: 124265461

GI number: 124265461

Start: 290822

End: 291787

Strand: Direct

Name: yfdV [C]

Synonym: Mpe_A0268

Alternate gene names: 124265461

Gene position: 290822-291787 (Clockwise)

Preceding gene: 124265459

Following gene: 124265462

Centisome position: 7.19

GC content: 71.01

Gene sequence:

>966_bases
ATGTCTCCGTTGATCTTCCTCAAGCTCCTGGCGATCTTCGTGACGATCGGCATCGGCTGGGTGGCCGGCCGCTGCAAGCC
TTTCGCTGGCGGCGAGGCGGCGCGCATCCTCTCGAATGCGGCGTTCTACGTGTTCGCGCCGGCGCTGCTGTTCCGTGCCA
CGGCGCGCATCGACCTGGGCACGCTGCCCTGGCAGGCGCTGGGGGCCTTCTTCGTGCCGGTGGTGGGTTGGATGCTGTTG
GTGTACCTGCTGCAGCGCCGGTGCCGCGCCGCTGCGGCGGCACAGCCCGCGGTACGAGCCATCACCGCCTCGTTCGGCAA
CAACGCCCAGCTCGGCATCCCGATGGCCGCTGCGCTGTTCGGCGAGATCGGCCTGCAACTGCACCTGTCGATCGTCAGCC
TGCATGCGCTGATCCTGCTCACCGTGCTGACGCTGCTGGTCGAGCGCGACCTCGCCCACGCGATGGCGCGCGACGCCGGC
GCGCCGGCATCGCTGTCGCGCACGCTGCTGCTGACGGCGCGCAACACTGTCATCCACCCGATCGTGCTGCCGGTGCTGGC
CGGCATGGCCTGGAACCTGACGGGCGCGCCCATCCCCGGCCCGATCGACGAGGTGCTGCAGATGCTGGGCACTGCGGTCG
TGCCGTTGTGTCTGGTCGCGATCGGCCTGTCGCTCGGCCACTACGGCCTTCGCGGCGCGGCGGGCCCGGCGCTGCTGCTG
GCGGCAGCCAAGCTGCTGGTGCAACCGGCGCTGGTGCTCGCGGTCGGCTACGGCATGGGCCTGCGCGGGCTGGCGCTGGC
GGTGATCGTCATGGCCGCGGCGATGCCGACCGGCTCGAACGCGCTGATGTTCGCGCAGCGCTACCGCAGCGGCGAGGCGG
AGGCGACCGCCGCGATCGTGATCTCGACGCTGGCCTTCGCCGCCACGGCGCCGTTGTGGTTGCTGCTGACGCAGTGGCTG
AGCTGA

Upstream 100 bases:

>100_bases
CAGGTGCTTGAACATGGCAACCTCCTTGGCTGTGTCTTGAAAGACTAGTTCACGACGGAGTGATGCGCGACCGCTTCCGC
AGCTCCCGGATACTCGATCC

Downstream 100 bases:

>100_bases
GCCCAATGGACCGGCAGGGCCGGCCCTGCTTTGCGACAATCCGGTCATGAACGCACCCGACGCCACCCCCGTGATCGCGC
TGATGGACCGCCTGGGCAGC

Product: putative MdcF malonate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSPLIFLKLLAIFVTIGIGWVAGRCKPFAGGEAARILSNAAFYVFAPALLFRATARIDLGTLPWQALGAFFVPVVGWMLL
VYLLQRRCRAAAAAQPAVRAITASFGNNAQLGIPMAAALFGEIGLQLHLSIVSLHALILLTVLTLLVERDLAHAMARDAG
APASLSRTLLLTARNTVIHPIVLPVLAGMAWNLTGAPIPGPIDEVLQMLGTAVVPLCLVAIGLSLGHYGLRGAAGPALLL
AAAKLLVQPALVLAVGYGMGLRGLALAVIVMAAAMPTGSNALMFAQRYRSGEAEATAAIVISTLAFAATAPLWLLLTQWL
S

Sequences:

>Translated_321_residues
MSPLIFLKLLAIFVTIGIGWVAGRCKPFAGGEAARILSNAAFYVFAPALLFRATARIDLGTLPWQALGAFFVPVVGWMLL
VYLLQRRCRAAAAAQPAVRAITASFGNNAQLGIPMAAALFGEIGLQLHLSIVSLHALILLTVLTLLVERDLAHAMARDAG
APASLSRTLLLTARNTVIHPIVLPVLAGMAWNLTGAPIPGPIDEVLQMLGTAVVPLCLVAIGLSLGHYGLRGAAGPALLL
AAAKLLVQPALVLAVGYGMGLRGLALAVIVMAAAMPTGSNALMFAQRYRSGEAEATAAIVISTLAFAATAPLWLLLTQWL
S
>Mature_320_residues
SPLIFLKLLAIFVTIGIGWVAGRCKPFAGGEAARILSNAAFYVFAPALLFRATARIDLGTLPWQALGAFFVPVVGWMLLV
YLLQRRCRAAAAAQPAVRAITASFGNNAQLGIPMAAALFGEIGLQLHLSIVSLHALILLTVLTLLVERDLAHAMARDAGA
PASLSRTLLLTARNTVIHPIVLPVLAGMAWNLTGAPIPGPIDEVLQMLGTAVVPLCLVAIGLSLGHYGLRGAAGPALLLA
AAKLLVQPALVLAVGYGMGLRGLALAVIVMAAAMPTGSNALMFAQRYRSGEAEATAAIVISTLAFAATAPLWLLLTQWLS

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33418; Mature: 33286

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLIFLKLLAIFVTIGIGWVAGRCKPFAGGEAARILSNAAFYVFAPALLFRATARIDLG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLPWQALGAFFVPVVGWMLLVYLLQRRCRAAAAAQPAVRAITASFGNNAQLGIPMAAALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHH
GEIGLQLHLSIVSLHALILLTVLTLLVERDLAHAMARDAGAPASLSRTLLLTARNTVIHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCHHHHH
IVLPVLAGMAWNLTGAPIPGPIDEVLQMLGTAVVPLCLVAIGLSLGHYGLRGAAGPALLL
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAAKLLVQPALVLAVGYGMGLRGLALAVIVMAAAMPTGSNALMFAQRYRSGEAEATAAIV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHH
ISTLAFAATAPLWLLLTQWLS
HHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SPLIFLKLLAIFVTIGIGWVAGRCKPFAGGEAARILSNAAFYVFAPALLFRATARIDLG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLPWQALGAFFVPVVGWMLLVYLLQRRCRAAAAAQPAVRAITASFGNNAQLGIPMAAALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHH
GEIGLQLHLSIVSLHALILLTVLTLLVERDLAHAMARDAGAPASLSRTLLLTARNTVIHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCHHHHH
IVLPVLAGMAWNLTGAPIPGPIDEVLQMLGTAVVPLCLVAIGLSLGHYGLRGAAGPALLL
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAAKLLVQPALVLAVGYGMGLRGLALAVIVMAAAMPTGSNALMFAQRYRSGEAEATAAIV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHH
ISTLAFAATAPLWLLLTQWLS
HHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]