Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265220
Identifier: 124265220
GI number: 124265220
Start: 28840
End: 29307
Strand: Reverse
Name: 124265220
Synonym: Mpe_A0027
Alternate gene names: NA
Gene position: 29307-28840 (Counterclockwise)
Preceding gene: 124265221
Following gene: 124265219
Centisome position: 0.72
GC content: 72.65
Gene sequence:
>468_bases ATGTCTGCTGTCCTCGACACGCCCCCGGAGCTGTCCGTTCTCGTCGCCGCCCGCCGCGAGGCCGAGGCGAGCGCGCTGTC CCATGCCGGCGGGGTGACACCGCGCGACGCCTGGGCCCTGGTGCAGCAGGGCCACGCGGTGCTGGTGGACGTGCGCTCCG CCGAGGAGCGCAAGTTCGTCGGCCACGTGCCCGACAGCGTGCACGTGGCCTGGGCCACCGGCACCTCACTGACGCGCAAC CCGCGCTTCGTGCGCGAACTCGAGGCCAAGGTCGGAAAGGACCAGGTCGTGCTGCTGCTGTGCCGCAGCGGCAAGCGCTC GGCGCTGGCGGCGGAAGCCGCGGCCAAGGCCGGCTTCACGCAGGCCTACAACGTGCTCGAAGGCTTCGAGGGCGAACTCG ACGCCGCGCAGCAGCGCGGCCATGCCGACGGCTGGCGCCACCACGGCCTGCCATGGGTGCAGGATTGA
Upstream 100 bases:
>100_bases ATTGGTTCCGGTTCGGCCGCCAGCTCCCTACGCTGGCGGCTGTCTATAACCACCCGATCGACCGGCCGCCCGCGAGGCGG CGGAACGTCGATCCCGCGCC
Downstream 100 bases:
>100_bases GCGGCACCGCAGCGGGCGTGCTGCCGATCGACGCCGCACCGAGCTTCGACCTGGGCAGCGTGGTCGCGCAACTGCGCGCC GCGCGCGAGCGCTGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain Protein; Rhodanese-Related Sulfurtransferase Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFVGHVPDSVHVAWATGTSLTRN PRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFTQAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD
Sequences:
>Translated_155_residues MSAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFVGHVPDSVHVAWATGTSLTRN PRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFTQAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD >Mature_154_residues SAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFVGHVPDSVHVAWATGTSLTRNP RFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFTQAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16664; Mature: 16533
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHC GHVPDSVHVAWATGTSLTRNPRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFT CCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCHH QAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD HHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHC GHVPDSVHVAWATGTSLTRNPRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFT CCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCHH QAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD HHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA