Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265220

Identifier: 124265220

GI number: 124265220

Start: 28840

End: 29307

Strand: Reverse

Name: 124265220

Synonym: Mpe_A0027

Alternate gene names: NA

Gene position: 29307-28840 (Counterclockwise)

Preceding gene: 124265221

Following gene: 124265219

Centisome position: 0.72

GC content: 72.65

Gene sequence:

>468_bases
ATGTCTGCTGTCCTCGACACGCCCCCGGAGCTGTCCGTTCTCGTCGCCGCCCGCCGCGAGGCCGAGGCGAGCGCGCTGTC
CCATGCCGGCGGGGTGACACCGCGCGACGCCTGGGCCCTGGTGCAGCAGGGCCACGCGGTGCTGGTGGACGTGCGCTCCG
CCGAGGAGCGCAAGTTCGTCGGCCACGTGCCCGACAGCGTGCACGTGGCCTGGGCCACCGGCACCTCACTGACGCGCAAC
CCGCGCTTCGTGCGCGAACTCGAGGCCAAGGTCGGAAAGGACCAGGTCGTGCTGCTGCTGTGCCGCAGCGGCAAGCGCTC
GGCGCTGGCGGCGGAAGCCGCGGCCAAGGCCGGCTTCACGCAGGCCTACAACGTGCTCGAAGGCTTCGAGGGCGAACTCG
ACGCCGCGCAGCAGCGCGGCCATGCCGACGGCTGGCGCCACCACGGCCTGCCATGGGTGCAGGATTGA

Upstream 100 bases:

>100_bases
ATTGGTTCCGGTTCGGCCGCCAGCTCCCTACGCTGGCGGCTGTCTATAACCACCCGATCGACCGGCCGCCCGCGAGGCGG
CGGAACGTCGATCCCGCGCC

Downstream 100 bases:

>100_bases
GCGGCACCGCAGCGGGCGTGCTGCCGATCGACGCCGCACCGAGCTTCGACCTGGGCAGCGTGGTCGCGCAACTGCGCGCC
GCGCGCGAGCGCTGGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain Protein; Rhodanese-Related Sulfurtransferase Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFVGHVPDSVHVAWATGTSLTRN
PRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFTQAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD

Sequences:

>Translated_155_residues
MSAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFVGHVPDSVHVAWATGTSLTRN
PRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFTQAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD
>Mature_154_residues
SAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFVGHVPDSVHVAWATGTSLTRNP
RFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFTQAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16664; Mature: 16533

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHC
GHVPDSVHVAWATGTSLTRNPRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFT
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCHH
QAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD
HHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAVLDTPPELSVLVAARREAEASALSHAGGVTPRDAWALVQQGHAVLVDVRSAEERKFV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHC
GHVPDSVHVAWATGTSLTRNPRFVRELEAKVGKDQVVLLLCRSGKRSALAAEAAAKAGFT
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCHH
QAYNVLEGFEGELDAAQQRGHADGWRHHGLPWVQD
HHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA