Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is srpH [H]
Identifier: 124265219
GI number: 124265219
Start: 27887
End: 28855
Strand: Reverse
Name: srpH [H]
Synonym: Mpe_A0026
Alternate gene names: 124265219
Gene position: 28855-27887 (Counterclockwise)
Preceding gene: 124265220
Following gene: 124265218
Centisome position: 0.71
GC content: 72.24
Gene sequence:
>969_bases ATGGGTGCAGGATTGAGCGGCACCGCAGCGGGCGTGCTGCCGATCGACGCCGCACCGAGCTTCGACCTGGGCAGCGTGGT CGCGCAACTGCGCGCCGCGCGCGAGCGCTGGCGCGCCGGGCAACAGCGCCCGCGCGAGCCCGGTGGCCGCGAGCTGCCGT CGCGCGAAGCGCTGGAAGAGATCGTGCAGGGCCTGCGCGGCGCGCTGTTCCCGATGCGCCTGGGCCCGCCCGATCTGCGC CAGGAGAGCGAGGACTACTACGTCGGCCACACGCTCGACACGGTGCTCAACGCACTGCTCGGCCAGCTGCGGCTGGAGCT GCGCCACGACGCTCGCCAGCACGGTCGTCCCGACCTCGACAGCTACGCGCAGGCGCTCGCCAAGGTGCGCGCGTTCGCTG CCGCGCTGCCGCAGATCCGCAGCCTGCTCGACAGCGACGTGCAGGCCTCGTTCCGCGGCGACCCGGCGGCGCGCAGCGTC GACGAGGTGTTGCTGTGCTACCCCGGCATCGAAGCGATGATCCACCACCGCATCGCACACCGGCTGTACCGGCTGGGCGT GCCGCTGCTGGCGCGCATCGTCGCCGAGCTGGCGCACGGCAAGACCGGCATCGACATCCACCCCGGCGCCGAGATCGGTC CGGGCTTCTTCATCGACCACGGCACCGGCGTCGTGATCGGCGAGACCGCGGTGATCGGCGAGAGGGTGCGCGTCTACCAG GCGGTGACGCTGGGCGCCAAGCGCTTCCCGACCGACGAGAAGGGCGACCTGCAGAAGGGCCTGCCGCGCCACCCGATCGT CGAGGACGACGTGGTGGTCTACGCCGGCGCCACGATCCTCGGCCGCATCACCATCGGCCGCGGCTCCACGATCGGCGGCA ACGTGTGGCTGACGCGCAGCGTGCCGCCGGGCAGCAACGTGACCCAGGCCAACGCGCATAACGAAGTGTCGAGCGAGGGC CGCGCATGA
Upstream 100 bases:
>100_bases GCTTCACGCAGGCCTACAACGTGCTCGAAGGCTTCGAGGGCGAACTCGACGCCGCGCAGCAGCGCGGCCATGCCGACGGC TGGCGCCACCACGGCCTGCC
Downstream 100 bases:
>100_bases GCTCGCTGAGCGCCCATTTCGGTCGCGTCGTGCGGCAGCACCGTGAGCAGCGGCGCTGGTCGCAGGAGCTGCTGGCGCAT CGCGCGGAGATCAACCGCAG
Product: Serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MGAGLSGTAAGVLPIDAAPSFDLGSVVAQLRAARERWRAGQQRPREPGGRELPSREALEEIVQGLRGALFPMRLGPPDLR QESEDYYVGHTLDTVLNALLGQLRLELRHDARQHGRPDLDSYAQALAKVRAFAAALPQIRSLLDSDVQASFRGDPAARSV DEVLLCYPGIEAMIHHRIAHRLYRLGVPLLARIVAELAHGKTGIDIHPGAEIGPGFFIDHGTGVVIGETAVIGERVRVYQ AVTLGAKRFPTDEKGDLQKGLPRHPIVEDDVVVYAGATILGRITIGRGSTIGGNVWLTRSVPPGSNVTQANAHNEVSSEG RA
Sequences:
>Translated_322_residues MGAGLSGTAAGVLPIDAAPSFDLGSVVAQLRAARERWRAGQQRPREPGGRELPSREALEEIVQGLRGALFPMRLGPPDLR QESEDYYVGHTLDTVLNALLGQLRLELRHDARQHGRPDLDSYAQALAKVRAFAAALPQIRSLLDSDVQASFRGDPAARSV DEVLLCYPGIEAMIHHRIAHRLYRLGVPLLARIVAELAHGKTGIDIHPGAEIGPGFFIDHGTGVVIGETAVIGERVRVYQ AVTLGAKRFPTDEKGDLQKGLPRHPIVEDDVVVYAGATILGRITIGRGSTIGGNVWLTRSVPPGSNVTQANAHNEVSSEG RA >Mature_321_residues GAGLSGTAAGVLPIDAAPSFDLGSVVAQLRAARERWRAGQQRPREPGGRELPSREALEEIVQGLRGALFPMRLGPPDLRQ ESEDYYVGHTLDTVLNALLGQLRLELRHDARQHGRPDLDSYAQALAKVRAFAAALPQIRSLLDSDVQASFRGDPAARSVD EVLLCYPGIEAMIHHRIAHRLYRLGVPLLARIVAELAHGKTGIDIHPGAEIGPGFFIDHGTGVVIGETAVIGERVRVYQA VTLGAKRFPTDEKGDLQKGLPRHPIVEDDVVVYAGATILGRITIGRGSTIGGNVWLTRSVPPGSNVTQANAHNEVSSEGR A
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=170, Percent_Identity=38.8235294117647, Blast_Score=105, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 34578; Mature: 34447
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGLSGTAAGVLPIDAAPSFDLGSVVAQLRAARERWRAGQQRPREPGGRELPSREALEE CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH IVQGLRGALFPMRLGPPDLRQESEDYYVGHTLDTVLNALLGQLRLELRHDARQHGRPDLD HHHHHHHHCCCCCCCCHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SYAQALAKVRAFAAALPQIRSLLDSDVQASFRGDPAARSVDEVLLCYPGIEAMIHHRIAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH RLYRLGVPLLARIVAELAHGKTGIDIHPGAEIGPGFFIDHGTGVVIGETAVIGERVRVYQ HHHHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCEEEECHHHHHHHHHHHH AVTLGAKRFPTDEKGDLQKGLPRHPIVEDDVVVYAGATILGRITIGRGSTIGGNVWLTRS HHHHCHHCCCCCCCCCHHHCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCEEEEEC VPPGSNVTQANAHNEVSSEGRA CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GAGLSGTAAGVLPIDAAPSFDLGSVVAQLRAARERWRAGQQRPREPGGRELPSREALEE CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH IVQGLRGALFPMRLGPPDLRQESEDYYVGHTLDTVLNALLGQLRLELRHDARQHGRPDLD HHHHHHHHCCCCCCCCHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SYAQALAKVRAFAAALPQIRSLLDSDVQASFRGDPAARSVDEVLLCYPGIEAMIHHRIAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH RLYRLGVPLLARIVAELAHGKTGIDIHPGAEIGPGFFIDHGTGVVIGETAVIGERVRVYQ HHHHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCEEEECHHHHHHHHHHHH AVTLGAKRFPTDEKGDLQKGLPRHPIVEDDVVVYAGATILGRITIGRGSTIGGNVWLTRS HHHHCHHCCCCCCCCCHHHCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCEEEEEC VPPGSNVTQANAHNEVSSEGRA CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]