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The map label for this gene is tpiA [H]

Identifier: 124027819

GI number: 124027819

Start: 953145

End: 953924

Strand: Reverse

Name: tpiA [H]

Synonym: Hbut_0946

Alternate gene names: 124027819

Gene position: 953924-953145 (Counterclockwise)

Preceding gene: 124027820

Following gene: 124027814

Centisome position: 57.22

GC content: 54.23

Gene sequence:

>780_bases
TTGGGCACTGTACTGCTATCTGGGCTTTTTGCCCGCTACACGGTGAAGAGAGAGAAGGGGGATGCAATGACTAGTCGCCG
CACGCCCATACTCGCGATAAACTTTAAGGCATACCCTACGGCATTTGGTGAGAAAGGCTTAGCCATAGCTCTTGCAGCAG
ACCATGTAGCCGCCGAGTATGGAGGCAGCCTTGAGGTTATTGTGGCTGTTCCAGCAACCGAGATAGTACGGGTAAGCGAT
GCTGTAGAGCACGTAAAGGTGTATAGCCAACATGCTGACGCGGTGGAGCCCGGGCCTCACACGGGATTTCTCCCACTAGA
GGCTCTAAGAGAAGCTGGTGCCCGCGGAACAATCATAAACCATAGCGAGCACCGTGTCGGGCTAAACGATATAGACTTCG
TGATTAGAAGAGCGACAAGCTTAGGCATGGAGGTACTTGTATGCGCTGATACTCCTACAGCCGCAGCTGCTGCGGCGGCA
TTGTCGCCTACGATGATTGCTATCGAGCCACCAGAGCTTATTGGCACCGGCATACCCGTTTCTAGAGCCAAACCTGAAAT
TGTGAGAGAAACTGTTAGGCTGATAAGGATGATTAACCCAGAGGCAGTAGTGTTGACAGGTGCAGGCATAACAGTTGGAG
AGGATGCTGTGGCAGCGATAAGGCTTGGGACGCAGGGTGTACTTGTAGCCTCTGCGGTCATGAAGGCCTCGGATCCCGAG
GCAAAGATCCGGGAGCTGGCTGAGGCGCTGGCTAGGGCCGCCGAGAAGGAGCTAGGTTAG

Upstream 100 bases:

>100_bases
CCTCGAGGAGCATCAGCGCCGCCTCGAAAGGGCTAGGGATCGAGTCCTAGAGTATGTCGAGCCTCCAAAGTTCTAAGCGC
ATGAAGGAGGTGGCAATGTT

Downstream 100 bases:

>100_bases
CTCTCCTCATACCTTATACCTCCCTCTTCAAGGTAATTTAATCTGCTAGGCCCTCTATTACGTCGCATTATGCGCCGCTT
GATGCTCCAAGCAGCCTGGC

Product: triosephosphate isomerase

Products: NA

Alternate protein names: TIM; Triose-phosphate isomerase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGTVLLSGLFARYTVKREKGDAMTSRRTPILAINFKAYPTAFGEKGLAIALAADHVAAEYGGSLEVIVAVPATEIVRVSD
AVEHVKVYSQHADAVEPGPHTGFLPLEALREAGARGTIINHSEHRVGLNDIDFVIRRATSLGMEVLVCADTPTAAAAAAA
LSPTMIAIEPPELIGTGIPVSRAKPEIVRETVRLIRMINPEAVVLTGAGITVGEDAVAAIRLGTQGVLVASAVMKASDPE
AKIRELAEALARAAEKELG

Sequences:

>Translated_259_residues
MGTVLLSGLFARYTVKREKGDAMTSRRTPILAINFKAYPTAFGEKGLAIALAADHVAAEYGGSLEVIVAVPATEIVRVSD
AVEHVKVYSQHADAVEPGPHTGFLPLEALREAGARGTIINHSEHRVGLNDIDFVIRRATSLGMEVLVCADTPTAAAAAAA
LSPTMIAIEPPELIGTGIPVSRAKPEIVRETVRLIRMINPEAVVLTGAGITVGEDAVAAIRLGTQGVLVASAVMKASDPE
AKIRELAEALARAAEKELG
>Mature_258_residues
GTVLLSGLFARYTVKREKGDAMTSRRTPILAINFKAYPTAFGEKGLAIALAADHVAAEYGGSLEVIVAVPATEIVRVSDA
VEHVKVYSQHADAVEPGPHTGFLPLEALREAGARGTIINHSEHRVGLNDIDFVIRRATSLGMEVLVCADTPTAAAAAAAL
SPTMIAIEPPELIGTGIPVSRAKPEIVRETVRLIRMINPEAVVLTGAGITVGEDAVAAIRLGTQGVLVASAVMKASDPEA
KIRELAEALARAAEKELG

Specific function: Unknown

COG id: COG0149

COG function: function code G; Triosephosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the triosephosphate isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000652
- InterPro:   IPR022891
- InterPro:   IPR020861 [H]

Pfam domain/function: PF00121 TIM [H]

EC number: =5.3.1.1 [H]

Molecular weight: Translated: 27097; Mature: 26965

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVLLSGLFARYTVKREKGDAMTSRRTPILAINFKAYPTAFGEKGLAIALAADHVAAEY
CCHHHHHHHHHHHEEECCCCCCHHCCCCEEEEEEEEECCCCCCCCCEEEEEEHHHHHHHC
GGSLEVIVAVPATEIVRVSDAVEHVKVYSQHADAVEPGPHTGFLPLEALREAGARGTIIN
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEC
HSEHRVGLNDIDFVIRRATSLGMEVLVCADTPTAAAAAAALSPTMIAIEPPELIGTGIPV
CCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCEEEEECCHHHHCCCCCC
SRAKPEIVRETVRLIRMINPEAVVLTGAGITVGEDAVAAIRLGTQGVLVASAVMKASDPE
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEEEECCCHHHHHHHHHHCCCCH
AKIRELAEALARAAEKELG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTVLLSGLFARYTVKREKGDAMTSRRTPILAINFKAYPTAFGEKGLAIALAADHVAAEY
CHHHHHHHHHHHEEECCCCCCHHCCCCEEEEEEEEECCCCCCCCCEEEEEEHHHHHHHC
GGSLEVIVAVPATEIVRVSDAVEHVKVYSQHADAVEPGPHTGFLPLEALREAGARGTIIN
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEC
HSEHRVGLNDIDFVIRRATSLGMEVLVCADTPTAAAAAAALSPTMIAIEPPELIGTGIPV
CCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCEEEEECCHHHHCCCCCC
SRAKPEIVRETVRLIRMINPEAVVLTGAGITVGEDAVAAIRLGTQGVLVASAVMKASDPE
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEEEECCCHHHHHHHHHHCCCCH
AKIRELAEALARAAEKELG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]