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The map label for this gene is 124027598

Identifier: 124027598

GI number: 124027598

Start: 707174

End: 707764

Strand: Reverse

Name: 124027598

Synonym: Hbut_0719

Alternate gene names: NA

Gene position: 707764-707174 (Counterclockwise)

Preceding gene: 124027600

Following gene: 124027597

Centisome position: 42.45

GC content: 69.88

Gene sequence:

>591_bases
TTGCCTGTGCGGGCCGCCGGTGAGGATAGCCCGGTACCGGGGGGTGAGGAGGCTGAGGACGCCCTGGAGCTAGTCTACGT
GCTCGACACGACCGCGTTCATAGCCAGGTGGCCCCTCTACGCGCCGAGGGGCAGGATGTACACTACGAGCCTCGTCCTGG
GCGAGGTCCGGGACCCGTCTAGCAGGGAGGGCCTGGAGCTGGCGCTGAGCCTCGGCAGGGTCGAGGTCCGCGACCCCTCC
CCGGGGAGCATCCGCAGGGTGGAGAAGCTCGCGGCGCGGCACGGGCTCCACGTCTCGCTCAGCAGGACCGACCTCAGCGT
CCTGGCACTGGCGCTCGAGCTGGCTGGGGAGGGCCGCCGTGTCGTGGTGGTCACTGACGACTATAGCGTCCAGAACCTGG
CCGCGCTGCTCGGCCTGGAGTACCGGAGCCTCCGCACACGGGGTATAAGCAGGGTGGAGGACTACGAGGCTGTCTGCCCA
GCGTGCGGCTACCGGTCCCGGAGGCCGGGTGAACGGGTATGCCCCGTGTGCGGAACCCCGCTATCCAGGAGGAGGACATC
CAGGAGGACATCCGGGCGCCGCCCCAGCTAG

Upstream 100 bases:

>100_bases
CGGGGGTGGAGGTAGAGCTTATACACGCGACCAGGCCGGCCAAGCTGATAGTGGATGGTGTCTACGAGAAGCTGCTGTCC
CGCGGGGCCGTGGTGAGGGC

Downstream 100 bases:

>100_bases
ACTATGATGCTGGGCTGCTGCGGGAGCTGCGCAGGGTCTACGGCGGAGCCCTAAGCGCGGCGCTCCAGGCGATACTGGAG
CCCCCCGCCAGGTACTACGT

Product: nucleic acid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPVRAAGEDSPVPGGEEAEDALELVYVLDTTAFIARWPLYAPRGRMYTTSLVLGEVRDPSSREGLELALSLGRVEVRDPS
PGSIRRVEKLAARHGLHVSLSRTDLSVLALALELAGEGRRVVVVTDDYSVQNLAALLGLEYRSLRTRGISRVEDYEAVCP
ACGYRSRRPGERVCPVCGTPLSRRRTSRRTSGRRPS

Sequences:

>Translated_196_residues
MPVRAAGEDSPVPGGEEAEDALELVYVLDTTAFIARWPLYAPRGRMYTTSLVLGEVRDPSSREGLELALSLGRVEVRDPS
PGSIRRVEKLAARHGLHVSLSRTDLSVLALALELAGEGRRVVVVTDDYSVQNLAALLGLEYRSLRTRGISRVEDYEAVCP
ACGYRSRRPGERVCPVCGTPLSRRRTSRRTSGRRPS
>Mature_195_residues
PVRAAGEDSPVPGGEEAEDALELVYVLDTTAFIARWPLYAPRGRMYTTSLVLGEVRDPSSREGLELALSLGRVEVRDPSP
GSIRRVEKLAARHGLHVSLSRTDLSVLALALELAGEGRRVVVVTDDYSVQNLAALLGLEYRSLRTRGISRVEDYEAVCPA
CGYRSRRPGERVCPVCGTPLSRRRTSRRTSGRRPS

Specific function: Unknown

COG id: COG1439

COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0129 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006596
- InterPro:   IPR022907
- InterPro:   IPR022785 [H]

Pfam domain/function: PF08745 UPF0278 [H]

EC number: NA

Molecular weight: Translated: 21502; Mature: 21371

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRAAGEDSPVPGGEEAEDALELVYVLDTTAFIARWPLYAPRGRMYTTSLVLGEVRDPS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC
SREGLELALSLGRVEVRDPSPGSIRRVEKLAARHGLHVSLSRTDLSVLALALELAGEGRR
CCCHHHHHEECCEEEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCE
VVVVTDDYSVQNLAALLGLEYRSLRTRGISRVEDYEAVCPACGYRSRRPGERVCPVCGTP
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
LSRRRTSRRTSGRRPS
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PVRAAGEDSPVPGGEEAEDALELVYVLDTTAFIARWPLYAPRGRMYTTSLVLGEVRDPS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC
SREGLELALSLGRVEVRDPSPGSIRRVEKLAARHGLHVSLSRTDLSVLALALELAGEGRR
CCCHHHHHEECCEEEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCE
VVVVTDDYSVQNLAALLGLEYRSLRTRGISRVEDYEAVCPACGYRSRRPGERVCPVCGTP
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
LSRRRTSRRTSGRRPS
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]