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The map label for this gene is 124027275

Identifier: 124027275

GI number: 124027275

Start: 369999

End: 370295

Strand: Reverse

Name: 124027275

Synonym: Hbut_0380

Alternate gene names: NA

Gene position: 370295-369999 (Counterclockwise)

Preceding gene: 124027276

Following gene: 124027270

Centisome position: 22.21

GC content: 52.53

Gene sequence:

>297_bases
ATGAAGTTCTGCCCCCGCTGCGGTGGCCTCATGATACCTGCAGGTCGTGAAGGAGACAACGTAATCCTACGCTGCACTCG
ATGTGGTTACACGGAGACAATAAGCGCTAAACAGGTAACCGACTACACCATAGTGGGGGAAACGCCAAAGGAAGAACACA
CAATAACAACGCTAAAAGTCAGTGAGGCCAAACGCCGCCCAGCCAAGACGCTCGAGGAGTGGGAGCAGGAGAGAGAAGAG
TACCGCGAAGTCCTACAAGAACTCCTACAGCAAGAACTCGAAGGCACTGAAGAGTAA

Upstream 100 bases:

>100_bases
CATAGCACGCAGCCACGAAAAATATATACACACCCCATGCCTAGCAGTGCGGTGGCCCCAAACACATCCCAACAAAGCAC
ATGGTTAGGGGATGAACGGG

Downstream 100 bases:

>100_bases
ACTCCACTAGGAGACATGAAGCAAGAATGCCGATTAACCATTATAACCCTCCCACTAACCACAACACCTTCTTAACGGTG
CGGGGGTGCCCGAGCCAGGT

Product: RNA polymerase, subunit M

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKFCPRCGGLMIPAGREGDNVILRCTRCGYTETISAKQVTDYTIVGETPKEEHTITTLKVSEAKRRPAKTLEEWEQEREE
YREVLQELLQQELEGTEE

Sequences:

>Translated_98_residues
MKFCPRCGGLMIPAGREGDNVILRCTRCGYTETISAKQVTDYTIVGETPKEEHTITTLKVSEAKRRPAKTLEEWEQEREE
YREVLQELLQQELEGTEE
>Mature_98_residues
MKFCPRCGGLMIPAGREGDNVILRCTRCGYTETISAKQVTDYTIVGETPKEEHTITTLKVSEAKRRPAKTLEEWEQEREE
YREVLQELLQQELEGTEE

Specific function: Unknown

COG id: COG1594

COG function: function code K; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11306; Mature: 11306

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFCPRCGGLMIPAGREGDNVILRCTRCGYTETISAKQVTDYTIVGETPKEEHTITTLKV
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEE
SEAKRRPAKTLEEWEQEREEYREVLQELLQQELEGTEE
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFCPRCGGLMIPAGREGDNVILRCTRCGYTETISAKQVTDYTIVGETPKEEHTITTLKV
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEE
SEAKRRPAKTLEEWEQEREEYREVLQELLQQELEGTEE
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA