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The map label for this gene is 124027270

Identifier: 124027270

GI number: 124027270

Start: 366139

End: 366594

Strand: Reverse

Name: 124027270

Synonym: Hbut_0374

Alternate gene names: NA

Gene position: 366594-366139 (Counterclockwise)

Preceding gene: 124027275

Following gene: 124027269

Centisome position: 21.99

GC content: 46.05

Gene sequence:

>456_bases
TTGAGTTATGGGCTGTTGAATCGGGTACAGATCACGGTGCTAGCACTTAGAGATAAGGGGCTGGGGCTGGGCGAGATAGC
AAGAATGTTGGGTCTGAGCAAACAAGCCGTATGGTCTATTGAGAAGAGAGCACGGAGACTACTTGAGAATGCAGCTAAAA
CTCTTGCAGCCTACGAGCTAGCTACAGCAGCATCTGTAATAGTAGTGAACCCCGATACCGATCTCGCTAAACTTCCGTCA
TACGTAATTAGGGAGGCTGATGCCAATGGGGTTAAGCTCAGACTCGACTATGCTGGCATCTATGTATTCGTAAGGAACGA
GTCAAAAAAATGTACTAGAGACAACGGCCTCGACAATTTCGCTATACTCATCTTTAGAGATGGAAGACTACGCGTCTACT
GCCTAAGAGAAATAGAAAGCCTCCTAGATCTCGCAGGAAAAATTGTAGAAGTTTGA

Upstream 100 bases:

>100_bases
GCGAGAGCCCTCCGCAACCAACATCTCCGAGGCATAGTGTACTTGAGTAGGAAAAATAAATAACTATTCCCTTATTCGAA
GTAAATATGGTGACATGTAC

Downstream 100 bases:

>100_bases
TGTTGCAAGGAATAAGGAATAGTGTGTAAATTAATTATTTAAATTAATTATTATATCGTCCAAAGCAATTGCAATACCTA
GAGCAAGTCATAGGTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSYGLLNRVQITVLALRDKGLGLGEIARMLGLSKQAVWSIEKRARRLLENAAKTLAAYELATAASVIVVNPDTDLAKLPS
YVIREADANGVKLRLDYAGIYVFVRNESKKCTRDNGLDNFAILIFRDGRLRVYCLREIESLLDLAGKIVEV

Sequences:

>Translated_151_residues
MSYGLLNRVQITVLALRDKGLGLGEIARMLGLSKQAVWSIEKRARRLLENAAKTLAAYELATAASVIVVNPDTDLAKLPS
YVIREADANGVKLRLDYAGIYVFVRNESKKCTRDNGLDNFAILIFRDGRLRVYCLREIESLLDLAGKIVEV
>Mature_150_residues
SYGLLNRVQITVLALRDKGLGLGEIARMLGLSKQAVWSIEKRARRLLENAAKTLAAYELATAASVIVVNPDTDLAKLPSY
VIREADANGVKLRLDYAGIYVFVRNESKKCTRDNGLDNFAILIFRDGRLRVYCLREIESLLDLAGKIVEV

Specific function: Putative transcriptional regulator [H]

COG id: COG1356

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfx family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007630
- InterPro:   IPR004645
- InterPro:   IPR018384 [H]

Pfam domain/function: PF04545 Sigma70_r4 [H]

EC number: NA

Molecular weight: Translated: 16798; Mature: 16667

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYGLLNRVQITVLALRDKGLGLGEIARMLGLSKQAVWSIEKRARRLLENAAKTLAAYEL
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAASVIVVNPDTDLAKLPSYVIREADANGVKLRLDYAGIYVFVRNESKKCTRDNGLDNF
HHHEEEEEECCCCCHHHCCHHHHHCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCE
AILIFRDGRLRVYCLREIESLLDLAGKIVEV
EEEEEECCCEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYGLLNRVQITVLALRDKGLGLGEIARMLGLSKQAVWSIEKRARRLLENAAKTLAAYEL
CCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAASVIVVNPDTDLAKLPSYVIREADANGVKLRLDYAGIYVFVRNESKKCTRDNGLDNF
HHHEEEEEECCCCCHHHCCHHHHHCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCE
AILIFRDGRLRVYCLREIESLLDLAGKIVEV
EEEEEECCCEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA