Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025555
Identifier: 124025555
GI number: 124025555
Start: 778789
End: 779589
Strand: Direct
Name: 124025555
Synonym: NATL1_08481
Alternate gene names: NA
Gene position: 778789-779589 (Clockwise)
Preceding gene: 124025551
Following gene: 124025560
Centisome position: 41.76
GC content: 30.09
Gene sequence:
>801_bases TTGCTATTAATCAAAGTGAAAGCCCATATTCCTCGTGTTGACTTTGTTATTTTGAAAACAAATCATAATAAATTAATGAA CTATAAAAATGTCATTAAAGAGTTTTTAGGAAAAGAGAGATTTTTTCTCGATCAAAAAAAAAGCCTAATAGTTTTGCTTG GTTCTTTTGCTGATTTTGATAGTTTTGAATACTCTCAACAATTATCAGCTAAATCAAATTGGTTGGAAAAGCACTCAGTT GATTTGATTTTGATAGGTATTGGGAGTGAAAAGTCTAAAGAATCTTTTTGCAAGTTCAATAAGATTGATATAAATAATGT TGTTGCCGTAAAGAATGCTGACCTTCATGAAAAACTTAATCTGAATTCTGGGCTTGTCACTCAAATGCCGGCAATAATTA ATCTATTGATTATGTGCACAGGAATAAATTCCAGAGGTACGATCAAGGAAGTTTTAAGAGGTTATTTTGGGGATAAAAAT GCAAGCAGTTTATTCACTTTTGATGAGGATATAAATTTAGGTCCTTTTTCTTTGTTGAAAGGAAGTATGTTTGATATTTT TTCAAAAAAACAAAATTTACGCCCTTTTGAGCTTGCTACTAGGAGACTTATGAATATGATTGAAATTCTTTCGAATTGGA ATACTTATGTACCTGATTCTGCATTCTTAACTCAAAGAGGAGCAACAATTCTATTGAATGAAAAAGATGAGGTCTTATAT GAATTTATTTCTGAAAGTCTTTTAGGGTATGCAAGTAAAATGAGTGCACCATTATCATTCTTAGATGATACTTTGAATTA A
Upstream 100 bases:
>100_bases TTGTAGGTTTTGTACATATTTCACGAACATCTGCTACTAATTATGATCTTCGTGTTAGGGCAATATCTTATCCTTAAAGT CATTGGGATAACTATGATAT
Downstream 100 bases:
>100_bases TTCAACTCTTATGATCGGAAATAAATGCCTAGTATGTGGAAGCTCTAATATGAGAGCTGATCGCGCATTATCCGGAAGAT TAGTATGTAATTCATGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLLIKVKAHIPRVDFVILKTNHNKLMNYKNVIKEFLGKERFFLDQKKSLIVLLGSFADFDSFEYSQQLSAKSNWLEKHSV DLILIGIGSEKSKESFCKFNKIDINNVVAVKNADLHEKLNLNSGLVTQMPAIINLLIMCTGINSRGTIKEVLRGYFGDKN ASSLFTFDEDINLGPFSLLKGSMFDIFSKKQNLRPFELATRRLMNMIEILSNWNTYVPDSAFLTQRGATILLNEKDEVLY EFISESLLGYASKMSAPLSFLDDTLN
Sequences:
>Translated_266_residues MLLIKVKAHIPRVDFVILKTNHNKLMNYKNVIKEFLGKERFFLDQKKSLIVLLGSFADFDSFEYSQQLSAKSNWLEKHSV DLILIGIGSEKSKESFCKFNKIDINNVVAVKNADLHEKLNLNSGLVTQMPAIINLLIMCTGINSRGTIKEVLRGYFGDKN ASSLFTFDEDINLGPFSLLKGSMFDIFSKKQNLRPFELATRRLMNMIEILSNWNTYVPDSAFLTQRGATILLNEKDEVLY EFISESLLGYASKMSAPLSFLDDTLN >Mature_266_residues MLLIKVKAHIPRVDFVILKTNHNKLMNYKNVIKEFLGKERFFLDQKKSLIVLLGSFADFDSFEYSQQLSAKSNWLEKHSV DLILIGIGSEKSKESFCKFNKIDINNVVAVKNADLHEKLNLNSGLVTQMPAIINLLIMCTGINSRGTIKEVLRGYFGDKN ASSLFTFDEDINLGPFSLLKGSMFDIFSKKQNLRPFELATRRLMNMIEILSNWNTYVPDSAFLTQRGATILLNEKDEVLY EFISESLLGYASKMSAPLSFLDDTLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30255; Mature: 30255
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIKVKAHIPRVDFVILKTNHNKLMNYKNVIKEFLGKERFFLDQKKSLIVLLGSFADFD CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCC SFEYSQQLSAKSNWLEKHSVDLILIGIGSEKSKESFCKFNKIDINNVVAVKNADLHEKLN CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCHHHHCC LNSGLVTQMPAIINLLIMCTGINSRGTIKEVLRGYFGDKNASSLFTFDEDINLGPFSLLK CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH GSMFDIFSKKQNLRPFELATRRLMNMIEILSNWNTYVPDSAFLTQRGATILLNEKDEVLY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEECCHHHHHH EFISESLLGYASKMSAPLSFLDDTLN HHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MLLIKVKAHIPRVDFVILKTNHNKLMNYKNVIKEFLGKERFFLDQKKSLIVLLGSFADFD CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCC SFEYSQQLSAKSNWLEKHSVDLILIGIGSEKSKESFCKFNKIDINNVVAVKNADLHEKLN CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCHHHHCC LNSGLVTQMPAIINLLIMCTGINSRGTIKEVLRGYFGDKNASSLFTFDEDINLGPFSLLK CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH GSMFDIFSKKQNLRPFELATRRLMNMIEILSNWNTYVPDSAFLTQRGATILLNEKDEVLY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEECCHHHHHH EFISESLLGYASKMSAPLSFLDDTLN HHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA